AboutDialog AboutDialog.PageLoader AdfReader AlphaMonomer AlphaPolymer AminoMonomer AminoPolymer ApbsReader AppletWrapper ArrayListTransferHandler ArrayListTransferHandler.ArrayListTransferable ArrayUtil Atom Atom AtomCollection AtomData AtomDataReader AtomDataServer AtomIndexIterator AtomIteratorWithinModel AtomIteratorWithinSet AtomSetChooser AtomSetChooser.AtomSet AtomSetCollection AtomSetCollectionReader AtomShape Awt3D Axes AxesGenerator AxesRenderer Backbone BackboneGenerator BackboneRenderer Balls BallsGenerator BallsRenderer Base64 Bbcage BbcageGenerator BbcageRenderer BinaryDocument BioPolymer BioShape BioShapeCollection BioShapeRenderer BitSetUtil Bond Bond BondCollection BondIterator BondIteratorSelected Bond.BondSet BoxInfo Bspf Bspt Calculation Calculations CalculationsUFF CalculationsUFF.AngleCalc CalculationsUFF.DistanceCalc CalculationsUFF.ESCalc CalculationsUFF.OOPCalc CalculationsUFF.PairCalc CalculationsUFF.TorsionCalc CalculationsUFF.VDWCalc CarbohydrateMonomer CarbohydratePolymer Cartoon CartoonGenerator CartoonRenderer Chain CifReader CifReader.RidiculousFileFormatTokenizer Circle3D ClassPreloader Colix3D ColorEncoder ColorManager CommandHistory Compiler Compiler.FlowContext CompoundDocument CompoundDocument.CmpDocDirectoryEntry CompoundDocument.CmpDocHeader Console ConsoleDocument ConsoleTextArea ConsoleTextPane Console.ControlEnterTextArea CsfReader CubeIterator CubeReader CubeReader Cylinder3D DataManager DCT DefaultLogger Dialog Dialog.ExportChoiceListener Dialog.QualityListener Dialog.TypeFilter Dipole Dipoles DipolesGenerator DipolesRenderer DisplayPanel DisplayPanel.CheckBoxMenuItemAction DisplayPanel.DefineCenterAction DisplayPanel.HomeAction DisplayPanel.MoveToAction DisplayPanel.SetStatusAction Dots DotsGenerator DotsRenderer Draw DrawGenerator DrawMesh DrawRenderer Echo EchoGenerator EchoRenderer Eigen Element Ellipsoids EllipsoidsGenerator EllipsoidsRenderer Ellipsoids.Ellipsoid EnterListener EnvelopeCalculation Escape Eval Eval.Context Eval.Rpn Eval.ScriptException Export3D FFParam FileChooser FileDropper FileManager FileManager.DOMOpenThread FileManager.FileOpenThread FileManager.FilesOpenThread FilePreview FilePreview.JmolPanel FileReader FileTyper FoldingXyzReader Font3D FontLineShape FontLineShapeRenderer ForceField ForceFieldUFF FrameExportJmolAdapter FrameExportJmolAdapter.AtomIterator FrameExportJmolAdapter.BondIterator FrameRenderer Frank FrankGenerator FrankRenderer Function GamessReader GamessUKReader GamessUSReader GaussianReader Geodesic GeoSurface GeoSurfaceGenerator GeoSurfaceRenderer GhemicalMMReader GifEncoder GifEncoder.AdaptiveColorCollection GifEncoder.ColorItem GifEncoder.ColorVector GifEncoder.ColorVector.CountComparator GraphCharacteristics GraphControlData Graphics3D Group GT GT.Language GuiMap GuiMap GuiMap.GetKey GuiMap.GetKey GuiMap.KeyJCheckBox GuiMap.KeyJCheckBoxMenuItem GuiMap.KeyJMenu GuiMap.KeyJMenu GuiMap.KeyJMenuItem GuiMap.KeyJMenuItem GuiMap.KeyJRadioButtonMenuItem HallInfo HallInfo.RotationTerm Halos HalosGenerator HalosRenderer Helix HelpDialog HelpDialog.PageLoader Hermite3D HinReader HistoryFile Hover HoverRenderer Huffman ImageCreator ImageEncoder ImageSelection Int2IntHash Int2IntHash.Entry Interface InvalidSmilesException IsoFxyReader IsoMepReader IsoMOReader IsoPlaneReader Isosurface IsosurfaceGenerator IsosurfaceMesh IsosurfaceRenderer IsoShapeReader IsoSolventReader JaguarReader JaguarReader JmeReader Jmol Jmol JmolAdapter JmolAdapter.AtomIterator JmolAdapter.BondIterator JmolAdapter.StructureIterator JmolAppletInterface JmolAppletRegistry JmolBioResolver JmolConstants JmolDialogInterface JmolExportInterface JmolFileReaderInterface JmolImageCreatorInterface JmolInstance JmolPopup JmolPopupAwt JmolPopupSwing JmolPopup.CheckboxMenuItemListener JmolPopup.MenuItemListener JmolRendererInterface JmolResourceHandler JmolSelectionListener JmolSimpleViewer JmolStatusListener JmolViewer Jmol.AboutAction Jmol.ActionChangedListener Jmol.AppCloser Jmol.AtomSetChooserAction Jmol.CloseAction Jmol.ConsoleAction Jmol.CopyImageAction Jmol.CopyScriptAction Jmol.ExecuteScriptAction Jmol.ExitAction Jmol.ExportAction Jmol.MyStatusListener Jmol.MyStatusListener Jmol.NewAction Jmol.NewwinAction Jmol.OpenAction Jmol.OpenUrlAction Jmol.PasteClipboardAction Jmol.PovrayAction Jmol.PrintAction Jmol.RecentFilesAction Jmol.ScriptWindowAction Jmol.ToWebAction Jmol.UguideAction Jmol.ViewMeasurementTableAction Jmol.WhatsNewAction Jmol.WriteAction JpegEncoder JpegInfo Jvm12 Jvxl JvxlData JvxlReader Labels LabelsGenerator LabelsRenderer LcaoCartoon LcaoCartoonGenerator LcaoCartoonRenderer Leaf LimitedLineReader LimitedLineReader Line3D Logger LoggerInterface LogPanel LoopedStreams MarchingCubes MarchingSquares MarchingSquares.ContourVertex MarchingSquares.PlanarSquare Measure Measurement MeasurementPending MeasurementTable MeasurementTable.MeasurementListWindowListener MeasurementTable.MeasurementTableModel Measures MeasuresGenerator MeasuresRenderer MepCalculation MepCalculationInterface Mesh MeshCollection MeshData MeshDataServer MeshFileCollection MeshRenderer MeshRibbon MeshRibbonGenerator MeshRibbonRenderer MinAtom MinBond Minimizer MinimizerInterface Minimizer.MinimizationThread Model ModelCollection ModelCollection.StateScript ModelCollection.Structure ModelLoader ModelManager ModelSet Mol2Reader MoldenReader MolecularOrbital MolecularOrbitalGenerator MolecularOrbitalRenderer Molecule Molecules MolReader MonitorInputStream MonitorInputStream Monomer MopacData MopacDataReader MopacGraphfReader MopacReader MouseManager MouseManager10 MouseManager11 MouseManager14 MouseManager.HoverWatcher MouseWrapper11 MouseWrapper14 MOCalculation MOCalculationInterface Node Normix3D NucleicMonomer NucleicPolymer NumericDataUtils NWChemReader Object2d Object2dShape OdysseyReader OdysseyXMLReader Orbitals Parameters Parser PatternMatcher PdbReader PhosphorusMonomer PhosphorusPolymer PickingManager Platform3D Platform3D.ClearingThread PltFormattedReader Pmesh PmeshGenerator PmeshRenderer Pmesh.PmeshBinaryDocument PngEncoder Point3fi PointGroup PointGroup.Operation Polyhedra PolyhedraGenerator PolyhedraRenderer Polyhedra.Polyhedron Polymer PopInJmol PopupResourceBundle PovrayDialog PovrayDialog.PovrayWindowListener PovraySaver PpmEncoder PqrReader PreferencesDialog PreferencesDialog.PrefsAction PropertyManager ProteinStructure PsiReader QchemReader Quadric QuantumCalculation Quaternion RecentFilesDialog RepaintManager RepaintManager.AnimationThread Resolver Resolver Rgb16 Ribbons RibbonsGenerator RibbonsRenderer Rockets RocketsGenerator RocketsRenderer Rotation SaisieDlg ScriptButtons ScriptManager ScriptManager.CommandWatcher ScriptManager.ScriptQueueRunnable ScriptWindow ScriptWindow.ExecuteCommandThread SelectionManager Shade3D Shape ShapeRenderer Sheet ShelxReader SmarterJmolAdapter SmarterJmolAdapter.AtomIterator SmarterJmolAdapter.BondIterator SmarterJmolAdapter.StructureIterator SmilesAtom SmilesBond SmilesMatcherInterface SmilesMolecule SmilesParser SpaceGroup SpartanArchive SpartanReader SpartanSmolReader Sphere3D Splash Splash.WindowListener Stars StarsGenerator StarsRenderer StateManager StateManager.Connection StateManager.Connections StateManager.GlobalSettings StateManager.Orientation StatusBar StatusManager Sticks SticksGenerator SticksRenderer Strands StrandsGenerator StrandsRenderer StringDataUtils Structure SurfaceGenerator Swing3D Symmetry SymmetryInfo SymmetryInterface SymmetryOperation TempArray Test Text Text3D TextFormat TextShape TickerThread Token Token.Token2 Trace TraceGenerator TraceRenderer TransformManager TransformManager10 TransformManager11 TransformManager.SpinThread TransformManager.VibrationThread Translation Triangle3D Turn Uccage UccageGenerator UccageRenderer UnitCell UnitCell.Data Util V3000Reader Vectors VectorsGenerator VectorsRenderer VertexDataServer Viewer Visua VolumeData VolumeDataInterface VolumeDataReader VolumeFileReader VoxelReader WebExport WebMaker WebMOReader WebPanel WebPanel.InstanceCellRenderer WhatsNewDialog WhatsNewDialog.PageLoader WrappedApplet WrappedAppletLoader XmlArgusReader XmlArgusReader.ArgusHandler XmlChem3dReader XmlChem3dReader.Chem3dHandler XmlCmlReader XmlCmlReader.CmlHandler XmlMolproReader XmlMolproReader.MolproHandler XmlOdysseyReader XmlOdysseyReader.OdysseyHandler XmlReader XmlReader.DummyResolver XmlReader.JmolXmlHandler XplorReader XyzReader ZipUtil ZoneVisu _Exporter _MayaExporter _PovrayExporter _VrmlExporter