org.jmol.modelsetbio
Class PhosphorusPolymer

java.lang.Object
  extended by org.jmol.modelset.Polymer
      extended by org.jmol.modelsetbio.BioPolymer
          extended by org.jmol.modelsetbio.PhosphorusPolymer

 class PhosphorusPolymer
extends BioPolymer


Field Summary
 
Fields inherited from class org.jmol.modelsetbio.BioPolymer
bsSelectedMonomers, model, monomerCount, monomers
 
Fields inherited from class org.jmol.modelset.Polymer
leadAtomIndices, leadMidpoints, leadPoints, sheetPoints, type, TYPE_AMINO, TYPE_CARBOHYDRATE, TYPE_NUCLEIC, TYPE_OTHER, wingVectors
 
Constructor Summary
PhosphorusPolymer(Monomer[] monomers)
           
 
Method Summary
 
Methods inherited from class org.jmol.modelsetbio.BioPolymer
allocateBioPolymer, calcPhiPsiAngles, calcSelectedMonomersCount, calculateRamachandranHelixAngle, clearStructures, findNearestAtomIndex, getControlPoints, getIndex, getInitiatorPoint, getLeadAtomIndices, getLeadMidPoint, getLeadMidpoints, getLeadPoint, getLeadPoint, getLeadPoints, getMonomerCount, getMonomers, getPdbData, getPointPoint, getPolymerInfo, getPolymerPointsAndVectors, getPolymerSequenceAtoms, getProteinStructure, getSelectedMonomerCount, getSequence, getTerminatorPoint, getWingPoint, getWingVectors, hasWingPoints, isMonomerSelected, recalculateLeadMidpointsAndWingVectors, removeProteinStructure, setConformation
 
Methods inherited from class org.jmol.modelset.Polymer
addSecondaryStructure, calcHydrogenBonds, calculateStructures, freeze, getPdbData, getType
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

PhosphorusPolymer

PhosphorusPolymer(Monomer[] monomers)