Modifier and Type | Constant Field | Value |
---|---|---|
private static final byte |
ADP_TYPE |
47 |
private static final byte |
ALT_ID |
15 |
private static final byte |
ANISO_B11 |
35 |
private static final byte |
ANISO_B12 |
38 |
private static final byte |
ANISO_B13 |
39 |
private static final byte |
ANISO_B22 |
36 |
private static final byte |
ANISO_B23 |
40 |
private static final byte |
ANISO_B33 |
37 |
private static final byte |
ANISO_BETA_11 |
41 |
private static final byte |
ANISO_BETA_12 |
44 |
private static final byte |
ANISO_BETA_13 |
45 |
private static final byte |
ANISO_BETA_22 |
42 |
private static final byte |
ANISO_BETA_23 |
46 |
private static final byte |
ANISO_BETA_33 |
43 |
private static final byte |
ANISO_LABEL |
20 |
private static final byte |
ANISO_MMCIF_ID |
21 |
private static final byte |
ANISO_MMCIF_U11 |
28 |
private static final byte |
ANISO_MMCIF_U12 |
31 |
private static final byte |
ANISO_MMCIF_U13 |
32 |
private static final byte |
ANISO_MMCIF_U22 |
29 |
private static final byte |
ANISO_MMCIF_U23 |
33 |
private static final byte |
ANISO_MMCIF_U33 |
30 |
private static final byte |
ANISO_U11 |
22 |
private static final byte |
ANISO_U12 |
25 |
private static final byte |
ANISO_U13 |
26 |
private static final byte |
ANISO_U22 |
23 |
private static final byte |
ANISO_U23 |
27 |
private static final byte |
ANISO_U33 |
24 |
private static final byte |
ASYM_ID |
59 |
private static final byte |
ATOM_ID |
70 |
private static final byte |
ATOM_TYPE_OXIDATION_NUMBER |
1 |
private static final byte |
ATOM_TYPE_SYMBOL |
0 |
private static final byte |
AUTH_ASYM_ID |
12 |
private static final byte |
AUTH_ATOM |
2 |
private static final byte |
AUTH_SEQ_ID |
13 |
private static final byte |
B_ISO |
10 |
private static final byte |
CARTN_X |
6 |
private static final byte |
CARTN_Y |
7 |
private static final byte |
CARTN_Z |
8 |
private static final byte |
CC_ATOM_CHARGE |
51 |
private static final byte |
CC_ATOM_ID |
49 |
private static final byte |
CC_ATOM_SYM |
50 |
private static final byte |
CC_ATOM_X |
52 |
private static final byte |
CC_ATOM_X_IDEAL |
55 |
private static final byte |
CC_ATOM_Y |
53 |
private static final byte |
CC_ATOM_Y_IDEAL |
56 |
private static final byte |
CC_ATOM_Z |
54 |
private static final byte |
CC_ATOM_Z_IDEAL |
57 |
private static final byte |
CC_COMP_ID |
48 |
private static final byte |
CCDC_GEOM_BOND_TYPE |
3 |
private static final byte |
CITATION_ID |
0 |
private static final byte |
CITATION_TITLE |
1 |
private static final byte |
COMP_ID |
11 |
private static final byte |
DISORDER_ASSEMBLY |
58 |
private static final byte |
DISORDER_GROUP |
19 |
private static final byte |
DUMMY_ATOM |
18 |
protected static final java.lang.String |
FAMILY_ATOM |
"_atom_site" |
private static final java.lang.String |
FAMILY_SGOP |
"_space_group_symop" |
private static final byte |
FRACT_X |
3 |
private static final byte |
FRACT_Y |
4 |
private static final byte |
FRACT_Z |
5 |
private static final byte |
GEOM_BOND_ATOM_SITE_LABEL_1 |
0 |
private static final byte |
GEOM_BOND_ATOM_SITE_LABEL_2 |
1 |
private static final byte |
GEOM_BOND_DISTANCE |
2 |
private static final byte |
GROUP_PDB |
16 |
private static final byte |
INS_CODE |
14 |
private static final byte |
LABEL |
1 |
private static final byte |
MODEL_NO |
17 |
private static final byte |
MOMENT_LABEL |
63 |
private static final byte |
MOMENT_PRELIM_X |
64 |
private static final byte |
MOMENT_PRELIM_Y |
65 |
private static final byte |
MOMENT_PRELIM_Z |
66 |
private static final byte |
MOMENT_X |
67 |
private static final byte |
MOMENT_Y |
68 |
private static final byte |
MOMENT_Z |
69 |
protected static final byte |
NONE |
-1 |
private static final byte |
OCCUPANCY |
9 |
private static final byte |
SEQ_ID |
71 |
private static final byte |
SITE_MULT |
61 |
private static final byte |
SUBSYS_ID |
60 |
private static final byte |
SYM_EQ_XYZ |
4 |
private static final byte |
SYM_MAGN_CENTERING |
9 |
private static final byte |
SYM_MAGN_REV |
7 |
private static final byte |
SYM_MAGN_REV_PRELIM |
6 |
private static final byte |
SYM_MAGN_SSG_ALG |
3 |
private static final byte |
SYM_MAGN_SSG_CENT_XYZ |
11 |
private static final byte |
SYM_MAGN_SSG_CENTERING |
10 |
private static final byte |
SYM_MAGN_SSG_REV |
8 |
private static final byte |
SYM_MAGN_XYZ |
1 |
private static final byte |
SYM_SSG_ALG |
2 |
private static final byte |
SYM_SSG_EQ_XYZ |
5 |
private static final byte |
SYM_XYZ |
0 |
private static final byte |
THERMAL_TYPE |
62 |
private static final java.lang.String |
titleRecords |
"__citation_title__publ_section_title__active_magnetic_irreps_details__" |
private static final byte |
TYPE_SYMBOL |
0 |
private static final byte |
U_ISO_OR_EQUIV |
34 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final byte |
ASSEM_ID |
0 |
private static final byte |
ASSEM_LIST |
2 |
private static final byte |
ASSEM_OPERS |
1 |
private static final byte |
BEG_ASYM_ID |
1 |
private static final byte |
BEG_INS_CODE |
3 |
private static final byte |
BEG_SEQ_ID |
2 |
private static final byte |
CHEM_COMP_BOND_AROMATIC_FLAG |
3 |
private static final byte |
CHEM_COMP_BOND_ATOM_ID_1 |
0 |
private static final byte |
CHEM_COMP_BOND_ATOM_ID_2 |
1 |
private static final byte |
CHEM_COMP_BOND_VALUE_ORDER |
2 |
private static final byte |
CHEM_COMP_ID |
0 |
private static final byte |
CHEM_COMP_NAME |
1 |
private static final byte |
CONF_TYPE_ID |
0 |
private static final byte |
END_ASYM_ID |
4 |
private static final byte |
END_INS_CODE |
6 |
private static final byte |
END_SEQ_ID |
5 |
private static final java.lang.String |
FAMILY_ASSEM |
"_pdbx_struct_assembly_gen" |
private static final java.lang.String |
FAMILY_COMPBOND |
"_chem_comp_bond" |
private static final java.lang.String |
FAMILY_OPER |
"_pdbx_struct_oper_list" |
private static final java.lang.String |
FAMILY_SHEET |
"_struct_sheet_range" |
private static final java.lang.String |
FAMILY_STRUCSITE |
"_struct_site_gen" |
private static final java.lang.String |
FAMILY_STRUCTCONF |
"_struct_conf" |
private static final byte |
HELIX_CLASS |
9 |
private static final byte |
NONPOLY_COMP_ID |
2 |
private static final byte |
NONPOLY_ENTITY_ID |
0 |
private static final byte |
NONPOLY_NAME |
1 |
private static final byte |
OPER_ID |
12 |
private static final byte |
OPER_XYZ |
13 |
private static final byte |
SERIAL_NO |
8 |
private static final byte |
SHEET_ID |
0 |
private static final byte |
SITE_ASYM_ID |
2 |
private static final byte |
SITE_COMP_ID |
1 |
private static final byte |
SITE_ID |
0 |
private static final byte |
SITE_INS_CODE |
4 |
private static final byte |
SITE_SEQ_ID |
3 |
private static final byte |
STRAND_ID |
7 |
private static final byte |
STRUCT_ID |
7 |
private static final byte |
STRUCT_REF_G1 |
1 |
private static final byte |
STRUCT_REF_G3 |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
DEPR_FD_COS |
72 |
private static final int |
DEPR_FD_SIN |
73 |
private static final int |
DEPR_FO_COS |
74 |
private static final int |
DEPR_FO_SIN |
75 |
private static final int |
DEPR_FU_COS |
76 |
private static final int |
DEPR_FU_SIN |
77 |
private static final int |
DISP_SAW_AX |
19 |
private static final int |
DISP_SAW_AY |
20 |
private static final int |
DISP_SAW_AZ |
21 |
private static final int |
DISP_SAW_C |
22 |
private static final int |
DISP_SAW_W |
23 |
private static final int |
DISP_SPEC_LABEL |
18 |
private static final int |
FD_ID |
40 |
private static final int |
FDP_ID |
43 |
private static final int |
FO_ID |
41 |
private static final int |
FOP_ID |
44 |
private static final int |
FU_ID |
42 |
private static final int |
FUP_ID |
45 |
private static final int |
FWV_DISP_AXIS |
12 |
private static final int |
FWV_DISP_COS |
14 |
private static final int |
FWV_DISP_LABEL |
11 |
private static final int |
FWV_DISP_MODULUS |
16 |
private static final int |
FWV_DISP_PHASE |
17 |
private static final int |
FWV_DISP_SEQ_ID |
13 |
private static final int |
FWV_DISP_SIN |
15 |
private static final int |
FWV_ID |
0 |
private static final int |
FWV_OCC_COS |
26 |
private static final int |
FWV_OCC_LABEL |
24 |
private static final int |
FWV_OCC_MODULUS |
28 |
private static final int |
FWV_OCC_PHASE |
29 |
private static final int |
FWV_OCC_SEQ_ID |
25 |
private static final int |
FWV_OCC_SIN |
27 |
private static final int |
FWV_SPIN_AXIS |
49 |
private static final int |
FWV_SPIN_COS |
51 |
private static final int |
FWV_SPIN_LABEL |
48 |
private static final int |
FWV_SPIN_MODULUS |
53 |
private static final int |
FWV_SPIN_PHASE |
54 |
private static final int |
FWV_SPIN_SEQ_ID |
50 |
private static final int |
FWV_SPIN_SIN |
52 |
private static final int |
FWV_U_COS |
36 |
private static final int |
FWV_U_LABEL |
33 |
private static final int |
FWV_U_MODULUS |
38 |
private static final int |
FWV_U_PHASE |
39 |
private static final int |
FWV_U_SEQ_ID |
35 |
private static final int |
FWV_U_SIN |
37 |
private static final int |
FWV_U_TENS |
34 |
private static final int |
FWV_X |
5 |
private static final int |
FWV_Y |
6 |
private static final int |
FWV_Z |
7 |
private static final int |
JANA_FWV_Q1_COEF |
8 |
private static final int |
JANA_FWV_Q2_COEF |
9 |
private static final int |
JANA_FWV_Q3_COEF |
10 |
private static final int |
JANA_OCC_ABS_LABEL |
46 |
private static final int |
JANA_OCC_ABS_O_0 |
47 |
private static final int |
LEG_DISP_AXIS |
62 |
private static final int |
LEG_DISP_COEF |
64 |
private static final int |
LEG_DISP_LABEL |
61 |
private static final int |
LEG_DISP_ORDER |
63 |
private static final int |
LEG_OCC_COEF |
71 |
private static final int |
LEG_OCC_LABEL |
69 |
private static final int |
LEG_OCC_ORDER |
70 |
private static final int |
LEG_U_COEF |
68 |
private static final int |
LEG_U_LABEL |
65 |
private static final int |
LEG_U_ORDER |
67 |
private static final int |
LEG_U_TENS |
66 |
private static final int |
NONE |
-1 |
private static final int |
OCC_CRENEL_C |
31 |
private static final int |
OCC_CRENEL_W |
32 |
private static final int |
OCC_SPECIAL_LABEL |
30 |
private static final int |
SPIN_SAW_AX |
56 |
private static final int |
SPIN_SAW_AY |
57 |
private static final int |
SPIN_SAW_AZ |
58 |
private static final int |
SPIN_SAW_C |
59 |
private static final int |
SPIN_SAW_W |
60 |
private static final int |
SPIN_SPEC_LABEL |
55 |
private static final int |
WV_ID |
1 |
private static final int |
WV_X |
2 |
private static final int |
WV_Y |
3 |
private static final int |
WV_Z |
4 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
U_LIST |
"U11U22U33U12U13U23UISO" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
ffTypes |
" CA CB CC CD CE CF CG CH CI CJ CK CM CN CP CQ CR CT CV CW HA HP HC HO HS HW LP NA NB NC NT OH OS OW SH AH BH HT HY AC BC CS OA OB OE OT dw hc hi hn ho hp hs hw hscp htip ca cg ci cn co coh cp cr cs ct c3h c3m c4h c4m na nb nh nho nh+ ni nn np npc nr nt nz oc oe oh op oscp otip sc sh sp br cl ca+ ar si lp nu sz oz az pz ga ge tioc titd li+ na+ rb+ cs+ mg2+ ca2+ ba2+ cu2+ cl- br- so4 sy oy ay ayt nac+ mg2c fe2c mn4c mn3c co2c ni2c lic+ pd2+ ti4c sr2c ca2c cly- hocl py vy nh4+ so4y lioh naoh koh foh cloh beoh al CE1 CF1 CF2 CF3 CG CD2 CH1E CH2E CH3E CM CP3 CPH1 CPH2 CQ66 CR55 CR56 CR66 CS66 CT CT3 CT4 CUA1 CUA2 CUA3 CUY1 CUY2 HA HC HMU HO HT LP NC NC2 NO2 NP NR1 NR2 NR3 NR55 NR56 NR66 NT NX OA OAC OC OE OH2 OK OM OS OSH OSI OT OW PO3 PO4 PT PUA1 PUY1 SE SH1E SK SO1 SO2 SO3 SO4 ST ST2 ST2 br br- br1 cl cl- cl1 cl12 cl13 cl14 cl1p ca+ cu+2 fe+2 mg+2 zn+2 cs+ li+ na+ rb+ al4z si si4 si4c si4z ar he kr ne xe dw hi hw ca cg ci co coh cp cr cs ct ct3 na nb nh nho ni no np nt nt2 nz oa oc oh op os ot sp bt cl\' si4l si5l si5t si6 si6o si\' br ca cc cd ce cf cl cp cq cu cv cx cy ha hc hn ho hp hs na nb nc nd nh oh os pb pc pd pe pf px py sh ss sx sy hn2 ho2 cz oo oz si sio hsi osi " |
private static final java.lang.String |
secondCharOnly |
" AH BH AC BC " |
private static final java.lang.String |
specialTypes |
" IM IP sz az sy ay ayt " |
private static final java.lang.String |
twoChar |
" al al4z ar ba2+ beoh br br- br1 ca+ ca2+ ca2c cl cl\' cl- cl1 cl12 cl13 cl14 cl1p cloh cly- co2c cs+ cu+2 cu2+ fe+2 fe2c ga ge he kr li+ lic+ lioh lp LP mg+2 mg2+ mg2c mn3c mn4c na+ nac+ naoh ne ni2c nu pd2+ rb+ si si\' si4 si4c si4l si4z si5l si5t si6 si6o sio sr2c ti4c tioc titd xe zn+2 " |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
_8PI2_ |
78.95683288574219f |
private static final java.lang.String |
lineOptions |
"ATOM HETATM MODEL CONECT HELIX SHEET TURN HET HETNAM ANISOU SITE CRYST1 SCALE1 SCALE2 SCALE3 EXPDTA FORMUL REMARK HEADER COMPND SOURCE TITLE SEQADV " |
private static final int |
MODE_HEX |
1 |
private static final int |
MODE_HYBRID36 |
2 |
private static final int |
MODE_PDB |
0 |
private static final float |
RAD_PER_DEG |
0.01745329238474369f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final byte |
APPEND |
97 |
private static final byte |
APPENDS |
101 |
private static final byte |
BINFLOAT |
71 |
private static final byte |
BINGET |
104 |
private static final byte |
BININT |
74 |
private static final byte |
BININT1 |
75 |
private static final byte |
BININT2 |
77 |
private static final byte |
BINPUT |
113 |
private static final byte |
BINSTRING |
84 |
private static final byte |
BINUNICODE |
87 |
private static final byte |
BUILD |
98 |
private static final byte |
EMPTY_DICT |
125 |
private static final byte |
EMPTY_LIST |
93 |
private static final byte |
GLOBAL |
99 |
private static final byte |
INT |
73 |
private static final byte |
LONG_BINGET |
106 |
private static final byte |
LONG_BINPUT |
114 |
private static final byte |
MARK |
40 |
private static final byte |
NONE |
78 |
private static final byte |
OBJ |
111 |
private static final byte |
SETITEM |
115 |
private static final byte |
SETITEMS |
117 |
private static final byte |
SHORT_BINSTRING |
85 |
private static final byte |
STOP |
46 |
private static final byte |
TUPLE |
116 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
active_selections |
351 |
static final int |
alignment_as_cylinders |
692 |
static final int |
all_states |
49 |
static final int |
ambient |
7 |
static final int |
ambient_occlusion_mode |
702 |
static final int |
ambient_occlusion_scale |
703 |
static final int |
ambient_occlusion_smooth |
704 |
static final int |
anaglyph_mode |
706 |
static final int |
angle_color |
575 |
static final int |
angle_label_position |
406 |
static final int |
angle_size |
405 |
static final int |
animation |
388 |
static final int |
animation_duration |
389 |
static final int |
antialias |
12 |
static final int |
async_builds |
506 |
static final int |
ati_bugs |
585 |
static final int |
atom_name_wildcard |
413 |
static final int |
atom_type_format |
660 |
static final int |
auto_classify_atoms |
360 |
static final int |
auto_color |
238 |
static final int |
auto_color_next |
239 |
static final int |
auto_copy_images |
557 |
static final int |
auto_defer_atom_count |
653 |
static final int |
auto_defer_builds |
567 |
static final int |
auto_dss |
323 |
static final int |
auto_hide_selections |
79 |
static final int |
auto_indicate_flags |
147 |
static final int |
auto_number_selections |
443 |
static final int |
auto_overlay |
603 |
static final int |
auto_remove_hydrogens |
158 |
static final int |
auto_rename_duplicate_objects |
561 |
static final int |
auto_sculpt |
162 |
static final int |
auto_show_lines |
51 |
static final int |
auto_show_nonbonded |
72 |
static final int |
auto_show_selections |
78 |
static final int |
auto_show_spheres |
420 |
static final int |
auto_zoom |
60 |
static final int |
autoclose_dialogs |
661 |
static final int |
backface_cull |
75 |
static final int |
batch_prefix |
187 |
static final int |
bg_gradient |
662 |
static final int |
bg_image_filename |
712 |
static final int |
bg_image_linear |
715 |
static final int |
bg_image_mode |
713 |
static final int |
bg_image_tilesize |
714 |
static final int |
bg_rgb |
6 |
static final int |
bg_rgb_bottom |
664 |
static final int |
bg_rgb_top |
663 |
static final int |
bonding_vdw_cutoff |
0 |
static final int |
button_mode |
63 |
static final int |
button_mode_name |
330 |
static final int |
cache_display |
73 |
static final int |
cache_frames |
31 |
static final int |
cache_max |
578 |
static final int |
cache_memory |
264 |
static final int |
cache_mode |
573 |
static final int |
cartoon_color |
236 |
static final int |
cartoon_cylindrical_helices |
180 |
static final int |
cartoon_debug |
105 |
static final int |
cartoon_discrete_colors |
125 |
static final int |
cartoon_dumbbell_length |
115 |
static final int |
cartoon_dumbbell_radius |
117 |
static final int |
cartoon_dumbbell_width |
116 |
static final int |
cartoon_fancy_helices |
118 |
static final int |
cartoon_fancy_sheets |
119 |
static final int |
cartoon_flat_cycles |
260 |
static final int |
cartoon_flat_sheets |
113 |
static final int |
cartoon_helix_radius |
181 |
static final int |
cartoon_highlight_color |
241 |
static final int |
cartoon_ladder_color |
450 |
static final int |
cartoon_ladder_mode |
448 |
static final int |
cartoon_ladder_radius |
449 |
static final int |
cartoon_loop_cap |
432 |
static final int |
cartoon_loop_quality |
93 |
static final int |
cartoon_loop_radius |
92 |
static final int |
cartoon_nucleic_acid_as_cylinders |
693 |
static final int |
cartoon_nucleic_acid_color |
451 |
static final int |
cartoon_nucleic_acid_mode |
361 |
static final int |
cartoon_oval_length |
100 |
static final int |
cartoon_oval_quality |
102 |
static final int |
cartoon_oval_width |
101 |
static final int |
cartoon_power |
94 |
static final int |
cartoon_power_b |
95 |
static final int |
cartoon_putty_quality |
378 |
static final int |
cartoon_putty_radius |
377 |
static final int |
cartoon_putty_range |
382 |
static final int |
cartoon_putty_scale_max |
380 |
static final int |
cartoon_putty_scale_min |
379 |
static final int |
cartoon_putty_scale_power |
381 |
static final int |
cartoon_putty_transform |
581 |
static final int |
cartoon_rect_length |
96 |
static final int |
cartoon_rect_width |
97 |
static final int |
cartoon_refine |
123 |
static final int |
cartoon_refine_normals |
112 |
static final int |
cartoon_refine_tips |
124 |
static final int |
cartoon_ring_color |
429 |
static final int |
cartoon_ring_finder |
430 |
static final int |
cartoon_ring_mode |
427 |
static final int |
cartoon_ring_radius |
508 |
static final int |
cartoon_ring_transparency |
452 |
static final int |
cartoon_ring_width |
428 |
static final int |
cartoon_round_helices |
111 |
static final int |
cartoon_sampling |
91 |
static final int |
cartoon_side_chain_helper |
383 |
static final int |
cartoon_smooth_cycles |
259 |
static final int |
cartoon_smooth_first |
257 |
static final int |
cartoon_smooth_last |
258 |
static final int |
cartoon_smooth_loops |
114 |
static final int |
cartoon_throw |
122 |
static final int |
cartoon_trace_atoms |
269 |
static final int |
cartoon_transparency |
279 |
static final int |
cartoon_tube_cap |
431 |
static final int |
cartoon_tube_quality |
104 |
static final int |
cartoon_tube_radius |
103 |
static final int |
cartoon_use_shader |
643 |
static final int |
cavity_cull |
13 |
static final int |
cgo_debug |
674 |
static final int |
cgo_dot_radius |
303 |
static final int |
cgo_dot_width |
302 |
static final int |
cgo_ellipsoid_quality |
564 |
static final int |
cgo_lighting |
671 |
static final int |
cgo_line_radius |
130 |
static final int |
cgo_line_width |
129 |
static final int |
cgo_ray_width_scale |
109 |
static final int |
cgo_shader_ub_color |
669 |
static final int |
cgo_shader_ub_flags |
694 |
static final int |
cgo_shader_ub_normal |
670 |
static final int |
cgo_sphere_quality |
189 |
static final int |
cgo_transparency |
441 |
static final int |
cgo_use_shader |
668 |
static final int |
clamp_colors |
214 |
static final int |
clean_electro_mode |
615 |
static final int |
COLOR_BACK |
-7 |
static final int |
COLOR_BLACK |
1 |
static final int |
COLOR_FRONT |
-6 |
static final int |
cone_quality |
583 |
static final int |
connect_bonded |
487 |
static final int |
connect_cutoff |
182 |
static final int |
connect_mode |
179 |
static final int |
coulomb_cutoff |
367 |
static final int |
coulomb_dielectric |
243 |
static final int |
coulomb_units_factor |
242 |
static final int |
cull_spheres |
33 |
static final int |
cylinder_shader_ff_workaround |
697 |
static final int |
cylinders_shader_filter_faces |
687 |
static final int |
dash_as_cylinders |
684 |
static final int |
dash_color |
574 |
static final int |
dash_gap |
59 |
static final int |
dash_length |
58 |
static final int |
dash_radius |
108 |
static final int |
dash_round_ends |
280 |
static final int |
dash_use_shader |
683 |
static final int |
dash_width |
107 |
static final int |
debug_pick |
209 |
static final int |
default_2fofc_map_rep |
659 |
static final int |
default_buster_names |
657 |
static final int |
default_fofc_map_rep |
658 |
static final int |
default_phenix_names |
655 |
static final int |
default_phenix_no_fill_names |
656 |
static final int |
default_refmac_names |
654 |
static final int |
defer_builds_mode |
409 |
static final int |
defer_updates |
304 |
static final int |
depth_cue |
84 |
static final int |
dihedral_color |
576 |
static final int |
dihedral_label_position |
408 |
static final int |
dihedral_size |
407 |
static final int |
direct |
8 |
static final int |
dist_counter |
57 |
static final int |
distance_exclusion |
460 |
static final int |
dot_as_spheres |
701 |
static final int |
dot_color |
210 |
static final int |
dot_density |
2 |
static final int |
dot_hydrogens |
28 |
static final int |
dot_lighting |
336 |
static final int |
dot_mode |
3 |
static final int |
dot_normals |
332 |
static final int |
dot_radius |
29 |
static final int |
dot_solvent |
206 |
static final int |
dot_use_shader |
700 |
static final int |
dot_width |
77 |
static final int |
draw_frames |
436 |
static final int |
draw_mode |
614 |
static final int |
dynamic_measures |
637 |
static final int |
dynamic_width |
610 |
static final int |
dynamic_width_factor |
611 |
static final int |
dynamic_width_max |
613 |
static final int |
dynamic_width_min |
612 |
static final int |
edit_light |
707 |
static final int |
editor_auto_dihedral |
416 |
static final int |
editor_auto_origin |
439 |
static final int |
editor_bond_cycle_mode |
633 |
static final int |
editor_label_fragments |
321 |
static final int |
ellipsoid_color |
570 |
static final int |
ellipsoid_probability |
568 |
static final int |
ellipsoid_quality |
563 |
static final int |
ellipsoid_scale |
569 |
static final int |
ellipsoid_transparency |
571 |
static final int |
excl_display_lists_shaders |
682 |
static final int |
fast_idle |
54 |
static final int |
fetch_host |
636 |
static final int |
fetch_path |
507 |
static final int |
field_of_view |
152 |
static final int |
fit_iterations |
185 |
static final int |
fit_kabsch |
608 |
static final int |
fit_tolerance |
186 |
static final int |
float_labels |
232 |
static final int |
fog |
88 |
static final int |
fog_start |
192 |
static final int |
frame |
194 |
static final int |
full_screen |
142 |
static final int |
gamma |
76 |
static final int |
gaussian_b_adjust |
255 |
static final int |
gaussian_b_floor |
272 |
static final int |
gaussian_resolution |
271 |
static final int |
geometry_export_mode |
586 |
static final int |
gl_ambient |
14 |
static final int |
gradient_max_length |
539 |
static final int |
gradient_min_length |
540 |
static final int |
gradient_min_slope |
541 |
static final int |
gradient_normal_min_dot |
542 |
static final int |
gradient_spacing |
544 |
static final int |
gradient_step_size |
543 |
static final int |
gradient_symmetry |
545 |
static final int |
grid_max |
580 |
static final int |
grid_mode |
577 |
static final int |
grid_slot |
579 |
static final int |
group_arrow_prefix |
547 |
static final int |
group_auto_mode |
537 |
static final int |
group_full_member_names |
538 |
static final int |
h_bond_cone |
286 |
static final int |
h_bond_cutoff_center |
282 |
static final int |
h_bond_cutoff_edge |
283 |
static final int |
h_bond_exclusion |
461 |
static final int |
h_bond_from_proton |
556 |
static final int |
h_bond_max_angle |
281 |
static final int |
h_bond_power_a |
284 |
static final int |
h_bond_power_b |
285 |
static final int |
half_bonds |
45 |
static final int |
hash_max |
22 |
static final int |
heavy_neighbor_cutoff |
639 |
static final int |
hide_long_bonds |
560 |
static final int |
hide_underscore_names |
458 |
static final int |
idle_delay |
52 |
static final int |
ignore_case |
414 |
static final int |
ignore_pdb_segi |
120 |
static final int |
image_copy_always |
601 |
static final int |
image_dots_per_inch |
434 |
static final int |
INIT |
710 |
static final int |
internal_feedback |
128 |
static final int |
internal_gui |
99 |
static final int |
internal_gui_control_size |
322 |
static final int |
internal_gui_mode |
341 |
static final int |
internal_gui_width |
98 |
static final int |
internal_prompt |
313 |
static final int |
isomesh_auto_state |
89 |
static final int |
keep_alive |
607 |
static final int |
label_anchor |
635 |
static final int |
label_angle_digits |
531 |
static final int |
label_color |
66 |
static final int |
label_digits |
529 |
static final int |
label_dihedral_digits |
532 |
static final int |
label_distance_digits |
530 |
static final int |
label_font_id |
328 |
static final int |
label_outline_color |
467 |
static final int |
label_position |
471 |
static final int |
label_shadow_mode |
462 |
static final int |
label_size |
453 |
static final int |
legacy_mouse_zoom |
442 |
static final int |
legacy_vdw_radii |
177 |
static final int |
light |
10 |
static final int |
light_count |
455 |
static final int |
light2 |
456 |
static final int |
light3 |
457 |
static final int |
light4 |
463 |
static final int |
light5 |
464 |
static final int |
light6 |
465 |
static final int |
light7 |
466 |
static final int |
light8 |
489 |
static final int |
light9 |
490 |
static final int |
line_as_cylinders |
679 |
static final int |
line_color |
526 |
static final int |
line_radius |
110 |
static final int |
line_smooth |
43 |
static final int |
line_stick_helper |
391 |
static final int |
line_use_shader |
645 |
static final int |
line_width |
44 |
static final int |
log_box_selections |
133 |
static final int |
log_conformations |
134 |
static final int |
logging |
131 |
static final int |
map_auto_expand_sym |
600 |
static final int |
matrix_mode |
438 |
static final int |
max_threads |
261 |
static final int |
max_triangles |
83 |
static final int |
max_ups |
602 |
static final int |
mesh_as_cylinders |
678 |
static final int |
mesh_carve_cutoff |
591 |
static final int |
mesh_carve_selection |
589 |
static final int |
mesh_carve_state |
590 |
static final int |
mesh_clear_cutoff |
594 |
static final int |
mesh_clear_selection |
592 |
static final int |
mesh_clear_state |
593 |
static final int |
mesh_color |
146 |
static final int |
mesh_cutoff |
588 |
static final int |
mesh_grid_max |
595 |
static final int |
mesh_lighting |
337 |
static final int |
mesh_mode |
145 |
static final int |
mesh_negative_color |
536 |
static final int |
mesh_negative_visible |
535 |
static final int |
mesh_normals |
334 |
static final int |
mesh_quality |
204 |
static final int |
mesh_radius |
74 |
static final int |
mesh_skip |
528 |
static final int |
mesh_solvent |
205 |
static final int |
mesh_type |
335 |
static final int |
mesh_use_shader |
672 |
static final int |
mesh_width |
90 |
static final int |
min_mesh_spacing |
1 |
static final int |
moe_separate_chains |
558 |
static final int |
motion_bias |
628 |
static final int |
motion_hand |
631 |
static final int |
motion_linear |
630 |
static final int |
motion_power |
627 |
static final int |
motion_simple |
629 |
static final int |
mouse_grid |
587 |
static final int |
mouse_limit |
211 |
static final int |
mouse_restart_movie_delay |
404 |
static final int |
mouse_scale |
212 |
static final int |
mouse_selection_mode |
354 |
static final int |
mouse_wheel_scale |
523 |
static final int |
mouse_z_scale |
619 |
static final int |
movie_animate_by_frame |
565 |
static final int |
movie_auto_interpolate |
621 |
static final int |
movie_auto_store |
620 |
static final int |
movie_delay |
16 |
static final int |
movie_fps |
550 |
static final int |
movie_loop |
299 |
static final int |
movie_panel |
618 |
static final int |
movie_panel_row_height |
622 |
static final int |
movie_quality |
634 |
static final int |
movie_rock |
572 |
static final int |
multiplex |
385 |
static final int |
nb_spheres_quality |
689 |
static final int |
nb_spheres_size |
688 |
static final int |
nb_spheres_use_shader |
690 |
static final int |
neighbor_cutoff |
638 |
static final int |
no_idle |
53 |
static final int |
nonbonded_as_cylinders |
686 |
static final int |
nonbonded_size |
65 |
static final int |
nonbonded_transparency |
524 |
static final int |
nonbonded_use_shader |
685 |
static final int |
normal_workaround |
40 |
static final int |
normalize_ccp4_maps |
126 |
static final int |
normalize_grd_maps |
314 |
static final int |
normalize_o_maps |
305 |
static final int |
nvidia_bugs |
433 |
static final int |
OBJECT_ALIGNMENT |
11 |
static final int |
OBJECT_CALCULATOR |
9 |
static final int |
OBJECT_CALLBACK |
5 |
static final int |
OBJECT_CGO |
6 |
static final int |
OBJECT_GADGET |
8 |
static final int |
OBJECT_GROUP |
12 |
static final int |
OBJECT_MAPDATA |
2 |
static final int |
OBJECT_MAPMESH |
3 |
static final int |
OBJECT_MEASURE |
4 |
static final int |
OBJECT_MOLECULE |
1 |
static final int |
OBJECT_SELECTION |
-1 |
static final int |
OBJECT_SLICE |
10 |
static final int |
OBJECT_SURFACE |
7 |
static final int |
offscreen_rendering_for_antialiasing |
695 |
static final int |
offscreen_rendering_multiplier |
696 |
static final int |
opaque_background |
435 |
static final int |
ortho |
23 |
static final int |
overlay |
61 |
static final int |
overlay_lines |
311 |
static final int |
pdb_conect_all |
329 |
static final int |
pdb_discrete_chains |
479 |
static final int |
pdb_echo_tags |
486 |
static final int |
pdb_formal_charges |
584 |
static final int |
pdb_hetatm_guess_valences |
562 |
static final int |
pdb_hetatm_sort |
267 |
static final int |
pdb_honor_model_number |
424 |
static final int |
pdb_ignore_conect |
632 |
static final int |
pdb_insertions_go_first |
307 |
static final int |
pdb_insure_orthogonal |
374 |
static final int |
pdb_literal_names |
190 |
static final int |
pdb_no_end_record |
301 |
static final int |
pdb_reformat_names_mode |
326 |
static final int |
pdb_retain_ids |
300 |
static final int |
pdb_standard_order |
256 |
static final int |
pdb_truncate_residue_name |
399 |
static final int |
pdb_unbond_cations |
480 |
static final int |
pdb_use_ter_records |
268 |
static final int |
pickable |
50 |
static final int |
png_file_gamma |
320 |
static final int |
png_screen_gamma |
319 |
static final int |
polar_neighbor_cutoff |
640 |
static final int |
power |
11 |
static final int |
pqr_workarounds |
387 |
static final int |
presentation |
397 |
static final int |
presentation_auto_quit |
415 |
static final int |
presentation_auto_start |
417 |
static final int |
presentation_mode |
398 |
static final int |
preserve_chempy_ids |
154 |
static final int |
pymol_space_max_blue |
217 |
static final int |
pymol_space_max_green |
216 |
static final int |
pymol_space_max_red |
215 |
static final int |
pymol_space_min_factor |
218 |
static final int |
raise_exceptions |
159 |
static final int |
ramp_blend_nearby_colors |
566 |
static final int |
rank_assisted_sorts |
425 |
static final int |
ray_blend_blue |
318 |
static final int |
ray_blend_colors |
315 |
static final int |
ray_blend_green |
317 |
static final int |
ray_blend_red |
316 |
static final int |
ray_clip_shadows |
522 |
static final int |
ray_color_ramps |
509 |
static final int |
ray_default_renderer |
151 |
static final int |
ray_direct_shade |
375 |
static final int |
ray_hint_camera |
510 |
static final int |
ray_hint_shadow |
511 |
static final int |
ray_improve_shadows |
149 |
static final int |
ray_interior_color |
240 |
static final int |
ray_interior_mode |
476 |
static final int |
ray_interior_reflect |
340 |
static final int |
ray_interior_shadows |
244 |
static final int |
ray_interior_texture |
245 |
static final int |
ray_label_specular |
527 |
static final int |
ray_legacy_lighting |
477 |
static final int |
ray_max_passes |
350 |
static final int |
ray_opaque_background |
137 |
static final int |
ray_orthoscopic |
392 |
static final int |
ray_oversample_cutoff |
270 |
static final int |
ray_pixel_scale |
327 |
static final int |
ray_scatter |
555 |
static final int |
ray_shadow_decay_factor |
475 |
static final int |
ray_shadow_decay_range |
491 |
static final int |
ray_shadow_fudge |
207 |
static final int |
ray_shadows |
195 |
static final int |
ray_spec_local |
525 |
static final int |
ray_texture |
139 |
static final int |
ray_texture_settings |
140 |
static final int |
ray_trace_color |
546 |
static final int |
ray_trace_depth_factor |
472 |
static final int |
ray_trace_disco_factor |
474 |
static final int |
ray_trace_fog |
67 |
static final int |
ray_trace_fog_start |
69 |
static final int |
ray_trace_frames |
30 |
static final int |
ray_trace_gain |
469 |
static final int |
ray_trace_mode |
468 |
static final int |
ray_trace_persist_cutoff |
553 |
static final int |
ray_trace_slope_factor |
473 |
static final int |
ray_trace_trans_cutoff |
552 |
static final int |
ray_transparency_contrast |
352 |
static final int |
ray_transparency_oblique |
551 |
static final int |
ray_transparency_oblique_power |
554 |
static final int |
ray_transparency_shadows |
199 |
static final int |
ray_transparency_spec_cut |
312 |
static final int |
ray_transparency_specular |
201 |
static final int |
ray_triangle_fudge |
208 |
static final int |
ray_volume |
665 |
static final int |
reflect |
9 |
static final int |
reflect_power |
153 |
static final int |
render_as_cylinders |
691 |
static final int |
REP_ANGLES |
17 |
static final int |
REP_CALLBACK |
14 |
static final int |
REP_CARTOON |
5 |
static final int |
REP_CELL |
12 |
static final int |
REP_CGO |
13 |
static final int |
REP_DASHES |
10 |
static final int |
REP_DIHEDRALS |
18 |
static final int |
REP_DOTS |
9 |
static final int |
REP_ELLIPSOID |
19 |
static final int |
REP_EXTENT |
15 |
static final int |
REP_JMOL_MAX |
23 |
static final int |
REP_JMOL_PUTTY |
22 |
static final int |
REP_JMOL_TRACE |
21 |
static final int |
REP_LABELS |
3 |
static final int |
REP_LINES |
7 |
static final int |
REP_MAX |
21 |
static final int |
REP_MESH |
8 |
static final int |
REP_NBSPHERES |
4 |
static final int |
REP_NONBONDED |
11 |
static final int |
REP_RIBBON |
6 |
static final int |
REP_SLICE |
16 |
static final int |
REP_SPHERES |
1 |
static final int |
REP_STICKS |
0 |
static final int |
REP_SURFACE |
2 |
static final int |
REP_VOLUME |
20 |
static final int |
retain_order |
266 |
static final int |
ribbon_as_cylinders |
680 |
static final int |
ribbon_color |
235 |
static final int |
ribbon_nucleic_acid_mode |
426 |
static final int |
ribbon_power |
17 |
static final int |
ribbon_power_b |
18 |
static final int |
ribbon_radius |
20 |
static final int |
ribbon_sampling |
19 |
static final int |
ribbon_side_chain_helper |
393 |
static final int |
ribbon_smooth |
237 |
static final int |
ribbon_throw |
121 |
static final int |
ribbon_trace_atoms |
196 |
static final int |
ribbon_transparency |
666 |
static final int |
ribbon_use_shader |
681 |
static final int |
ribbon_width |
106 |
static final int |
robust_logs |
132 |
static final int |
rock |
582 |
static final int |
rock_delay |
56 |
static final int |
roving_byres |
226 |
static final int |
roving_cartoon |
228 |
static final int |
roving_delay |
224 |
static final int |
roving_detail |
233 |
static final int |
roving_isomesh |
252 |
static final int |
roving_isosurface |
253 |
static final int |
roving_labels |
223 |
static final int |
roving_lines |
220 |
static final int |
roving_map1_level |
249 |
static final int |
roving_map1_name |
246 |
static final int |
roving_map2_level |
250 |
static final int |
roving_map2_name |
247 |
static final int |
roving_map3_level |
251 |
static final int |
roving_map3_name |
248 |
static final int |
roving_nb_spheres |
234 |
static final int |
roving_nonbonded |
231 |
static final int |
roving_origin |
219 |
static final int |
roving_origin_z |
308 |
static final int |
roving_origin_z_cushion |
309 |
static final int |
roving_polar_contacts |
229 |
static final int |
roving_polar_cutoff |
230 |
static final int |
roving_ribbon |
227 |
static final int |
roving_selection |
225 |
static final int |
roving_spheres |
222 |
static final int |
roving_sticks |
221 |
static final int |
save_pdb_ss |
183 |
static final int |
scene_animation |
390 |
static final int |
scene_animation_duration |
411 |
static final int |
scene_buttons |
599 |
static final int |
scene_buttons_mode |
598 |
static final int |
scene_current_name |
396 |
static final int |
scene_frame_mode |
623 |
static final int |
scene_loop |
400 |
static final int |
scene_restart_movie_delay |
403 |
static final int |
scenes_changed |
254 |
static final int |
sculpt_angl_weight |
168 |
static final int |
sculpt_auto_center |
478 |
static final int |
sculpt_avd_excl |
505 |
static final int |
sculpt_avd_gap |
503 |
static final int |
sculpt_avd_range |
504 |
static final int |
sculpt_avd_weight |
502 |
static final int |
sculpt_bond_weight |
167 |
static final int |
sculpt_field_mask |
174 |
static final int |
sculpt_hb_overlap |
175 |
static final int |
sculpt_hb_overlap_base |
176 |
static final int |
sculpt_line_weight |
184 |
static final int |
sculpt_max_max |
500 |
static final int |
sculpt_max_min |
499 |
static final int |
sculpt_max_scale |
497 |
static final int |
sculpt_max_weight |
498 |
static final int |
sculpt_memory |
178 |
static final int |
sculpt_min_max |
496 |
static final int |
sculpt_min_min |
495 |
static final int |
sculpt_min_scale |
493 |
static final int |
sculpt_min_weight |
494 |
static final int |
sculpt_nb_interval |
273 |
static final int |
sculpt_plan_weight |
170 |
static final int |
sculpt_pyra_inv_weight |
606 |
static final int |
sculpt_pyra_weight |
169 |
static final int |
sculpt_tors_tolerance |
275 |
static final int |
sculpt_tors_weight |
274 |
static final int |
sculpt_tri_max |
484 |
static final int |
sculpt_tri_min |
483 |
static final int |
sculpt_tri_mode |
485 |
static final int |
sculpt_tri_scale |
481 |
static final int |
sculpt_tri_weight |
482 |
static final int |
sculpt_vdw_scale |
163 |
static final int |
sculpt_vdw_scale14 |
164 |
static final int |
sculpt_vdw_vis_max |
447 |
static final int |
sculpt_vdw_vis_mid |
446 |
static final int |
sculpt_vdw_vis_min |
445 |
static final int |
sculpt_vdw_vis_mode |
444 |
static final int |
sculpt_vdw_weight |
165 |
static final int |
sculpt_vdw_weight14 |
166 |
static final int |
sculpting |
161 |
static final int |
sculpting_cycles |
171 |
static final int |
sdof_drag_scale |
597 |
static final int |
secondary_structure |
157 |
static final int |
security |
197 |
static final int |
sel_counter |
5 |
static final int |
selection_overlay |
81 |
static final int |
selection_round_points |
459 |
static final int |
selection_visible_only |
470 |
static final int |
selection_width |
80 |
static final int |
selection_width_max |
394 |
static final int |
selection_width_scale |
395 |
static final int |
seq_view |
353 |
static final int |
seq_view_alignment |
513 |
static final int |
seq_view_color |
362 |
static final int |
seq_view_discrete_by_state |
410 |
static final int |
seq_view_fill_char |
516 |
static final int |
seq_view_fill_color |
517 |
static final int |
seq_view_format |
357 |
static final int |
seq_view_label_color |
518 |
static final int |
seq_view_label_mode |
363 |
static final int |
seq_view_label_spacing |
355 |
static final int |
seq_view_label_start |
356 |
static final int |
seq_view_location |
358 |
static final int |
seq_view_overlay |
359 |
static final int |
seq_view_unaligned_color |
515 |
static final int |
seq_view_unaligned_mode |
514 |
static final int |
session_cache_optimize |
596 |
static final int |
session_changed |
521 |
static final int |
session_compression |
549 |
static final int |
session_file |
440 |
static final int |
session_migration |
333 |
static final int |
session_version_check |
200 |
static final int |
shader_path |
648 |
static final int |
shininess |
86 |
static final int |
show_alpha_checker |
437 |
static final int |
show_frame_rate |
617 |
static final int |
show_progress |
262 |
static final int |
simplify_display_lists |
265 |
static final int |
single_image |
15 |
static final int |
slice_dynamic_grid |
372 |
static final int |
slice_dynamic_grid_resolution |
373 |
static final int |
slice_grid |
371 |
static final int |
slice_height_map |
370 |
static final int |
slice_height_scale |
369 |
static final int |
slice_track_camera |
368 |
static final int |
slow_idle |
55 |
static final int |
smooth_color_triangle |
150 |
static final int |
smooth_half_bonds |
705 |
static final int |
solvent_radius |
4 |
static final int |
spec_count |
492 |
static final int |
spec_direct |
454 |
static final int |
spec_direct_power |
488 |
static final int |
spec_power |
25 |
static final int |
spec_reflect |
24 |
static final int |
specular |
85 |
static final int |
specular_intensity |
310 |
static final int |
sphere_color |
173 |
static final int |
sphere_mode |
421 |
static final int |
sphere_point_max_size |
422 |
static final int |
sphere_point_size |
423 |
static final int |
sphere_quality |
87 |
static final int |
sphere_scale |
155 |
static final int |
sphere_solvent |
203 |
static final int |
sphere_transparency |
172 |
static final int |
sphere_use_shader |
646 |
static final int |
spheroid_fill |
71 |
static final int |
spheroid_scale |
68 |
static final int |
spheroid_smooth |
70 |
static final int |
ss_helix_phi_exclude |
292 |
static final int |
ss_helix_phi_include |
291 |
static final int |
ss_helix_phi_target |
290 |
static final int |
ss_helix_psi_exclude |
289 |
static final int |
ss_helix_psi_include |
288 |
static final int |
ss_helix_psi_target |
287 |
static final int |
ss_strand_phi_exclude |
298 |
static final int |
ss_strand_phi_include |
297 |
static final int |
ss_strand_phi_target |
296 |
static final int |
ss_strand_psi_exclude |
295 |
static final int |
ss_strand_psi_include |
294 |
static final int |
ss_strand_psi_target |
293 |
static final int |
state |
193 |
static final int |
state_counter_mode |
667 |
static final int |
static_singletons |
82 |
static final int |
stereo |
365 |
static final int |
stereo_angle |
41 |
static final int |
stereo_double_pump_mono |
202 |
static final int |
stereo_dynamic_strength |
609 |
static final int |
stereo_mode |
188 |
static final int |
stereo_shift |
42 |
static final int |
stick_as_cylinders |
677 |
static final int |
stick_ball |
276 |
static final int |
stick_ball_color |
604 |
static final int |
stick_ball_ratio |
277 |
static final int |
stick_color |
376 |
static final int |
stick_debug |
673 |
static final int |
stick_fixed_radius |
278 |
static final int |
stick_good_geometry |
676 |
static final int |
stick_h_scale |
605 |
static final int |
stick_nub |
48 |
static final int |
stick_overlap |
47 |
static final int |
stick_quality |
46 |
static final int |
stick_radius |
21 |
static final int |
stick_round_nub |
675 |
static final int |
stick_transparency |
198 |
static final int |
stick_use_shader |
644 |
static final int |
stick_valence_scale |
512 |
static final int |
stop_on_exceptions |
160 |
static final int |
suppress_hidden |
548 |
static final int |
surface_best |
36 |
static final int |
surface_carve_cutoff |
344 |
static final int |
surface_carve_normal_cutoff |
519 |
static final int |
surface_carve_selection |
342 |
static final int |
surface_carve_state |
343 |
static final int |
surface_cavity_cutoff |
626 |
static final int |
surface_cavity_mode |
624 |
static final int |
surface_cavity_radius |
625 |
static final int |
surface_circumscribe |
501 |
static final int |
surface_clear_cutoff |
347 |
static final int |
surface_clear_selection |
345 |
static final int |
surface_clear_state |
346 |
static final int |
surface_color |
144 |
static final int |
surface_color_smoothing |
698 |
static final int |
surface_color_smoothing_threshold |
699 |
static final int |
surface_debug |
148 |
static final int |
surface_miserable |
136 |
static final int |
surface_mode |
143 |
static final int |
surface_negative_color |
534 |
static final int |
surface_negative_visible |
533 |
static final int |
surface_normal |
37 |
static final int |
surface_optimize_subsets |
384 |
static final int |
surface_poor |
127 |
static final int |
surface_proximity |
39 |
static final int |
surface_quality |
38 |
static final int |
surface_ramp_above_mode |
364 |
static final int |
surface_residue_cutoff |
641 |
static final int |
surface_solvent |
338 |
static final int |
surface_trim_cutoff |
348 |
static final int |
surface_trim_factor |
349 |
static final int |
surface_type |
331 |
static final int |
surface_use_shader |
642 |
static final int |
suspend_undo |
708 |
static final int |
suspend_undo_atom_count |
709 |
static final int |
suspend_updates |
141 |
static final int |
swap_dsn6_bytes |
306 |
static final int |
sweep_angle |
26 |
static final int |
sweep_mode |
401 |
static final int |
sweep_phase |
402 |
static final int |
sweep_speed |
27 |
static final int |
test1 |
34 |
static final int |
test2 |
35 |
static final int |
text |
62 |
static final int |
texture_fonts |
386 |
static final int |
trace_atoms_mode |
520 |
static final int |
transparency |
138 |
static final int |
transparency_global_sort |
559 |
static final int |
transparency_mode |
213 |
static final int |
transparency_picking_mode |
324 |
static final int |
triangle_max_passes |
339 |
static final int |
trim_dots |
32 |
static final int |
two_sided_lighting |
156 |
static final int |
unused_boolean_def_true |
419 |
static final int |
use_display_lists |
263 |
static final int |
use_shaders |
647 |
static final int |
valence |
64 |
static final int |
valence_mode |
616 |
static final int |
valence_size |
135 |
static final int |
validate_object_names |
418 |
static final int |
virtual_trackball |
325 |
static final int |
volume_bit_depth |
649 |
static final int |
volume_color |
650 |
static final int |
volume_data_range |
652 |
static final int |
volume_layers |
651 |
static final int |
wildcard |
412 |
static final int |
wizard_prompt_mode |
366 |
static final int |
wrap_output |
191 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MIN_RESNO |
-1000 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final byte |
ANUM |
2 |
private static final byte |
BFXN_ANGL |
6 |
private static final byte |
BTYPE |
1 |
private static final byte |
CHRG |
3 |
private static final byte |
COEF_INDICES |
5 |
private static final byte |
CONTRACTIONS |
8 |
private static final byte |
DIPOLE |
3 |
private static final byte |
EIG_VAL |
1 |
private static final byte |
EIG_VEC |
3 |
private static final byte |
EIG_VEC_COMPRESSED |
4 |
private static final byte |
GTO_EXP |
9 |
private static final byte |
ID |
-1 |
private static final byte |
MO_OCC |
2 |
private static final byte |
NORMAL_MODE |
1 |
private static final byte |
objCls1 |
1 |
private static final byte |
objCls2 |
3 |
private static final byte |
objID1 |
2 |
private static final byte |
objID2 |
4 |
private static final byte |
PCHRG |
5 |
private static final byte |
SHELL |
10 |
private static final byte |
STO_EXP |
7 |
private static final byte |
SYM |
1 |
private static final byte |
VIB_ENERGY |
2 |
private static final byte |
XYZ |
4 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
STD_ORIENTATION_ATOMIC_NUMBER_OFFSET |
1 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
ROOT3 |
1.7320507764816284f |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final float |
MIN_COEF |
9.999999747378752E-5f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
DC_LIST |
"(D1) (D4) (D6) (D2) (D3) (D5)" |
private static final java.lang.String |
DS_LIST |
"(D5) (D2) (D3) (D4) (D1)" |
private static final java.lang.String |
FS_LIST |
"(F1) (F2) (F3) (F4) (F5) (F6) (F7)" |
protected final int |
HEADER_GAMESS_OCCUPANCIES |
2 |
protected final int |
HEADER_GAMESS_ORIGINAL |
1 |
protected final int |
HEADER_GAMESS_UK_MO |
3 |
protected final int |
HEADER_NONE |
0 |
private static final java.lang.String |
P_LIST |
"(PX) (PY) (PZ)" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
_1_4pi |
0.07957747154594767 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
ATOM |
2 |
private static final int |
BOND |
3 |
private static final int |
MOLECULE |
1 |
private static final int |
TRANSFORMMAT |
4 |
private static final int |
UNSET |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final int |
CML |
1 |
protected static final int |
CRYSTAL |
2 |
protected static final int |
CRYSTAL_SCALAR |
3 |
protected static final int |
CRYSTAL_SYMMETRY |
4 |
protected static final int |
CRYSTAL_SYMMETRY_TRANSFORM3 |
5 |
protected static final int |
LATTICE_VECTOR |
18 |
protected static final int |
MODULE |
15 |
protected static final int |
MOLECULE |
6 |
protected static final int |
MOLECULE_ATOM |
8 |
protected static final int |
MOLECULE_ATOM_ARRAY |
7 |
protected static final int |
MOLECULE_ATOM_BUILTIN |
13 |
protected static final int |
MOLECULE_ATOM_SCALAR |
9 |
protected static final int |
MOLECULE_BOND |
11 |
protected static final int |
MOLECULE_BOND_ARRAY |
10 |
protected static final int |
MOLECULE_BOND_BUILTIN |
14 |
protected static final int |
MOLECULE_FORMULA |
12 |
protected static final int |
START |
0 |
protected static final int |
SYMMETRY |
17 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
RAD_TO_DEG |
57.295780181884766f |
private static final double |
TWOPI |
6.283185307179586 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
SG_ALIASES |
";P2=P121;P21=P1211;C2=C121;A2=A121;I2=I121;Pm=P1m1;Pc=P1c1;Pn=P1n1;Pa=P1a1;Cm=C1m1;Am=A1m1;Im=I1m1;Cc=C1c1;An=A1n1;Ia=I1a1;Aa=A1a1;Cn=C1n1;Ic=I1c1;P2/m=P12/m1;P21/m=P121/m1;C2/m=C12/m1;A2/m=A12/m1;I2/m=I12/m1;P2/c=P12/c1;P2/n=P12/n1;P2/a=P12/a1;P21/c=P121/c1;P21/n=P121/n1;P21/a=P121/a1;C2/c=C12/c1;A2/n=A12/n1;I2/a=I12/a1;A2/a=A12/a1;C2/n=C12/n1;I2/c=I12/c1;Pm3=Pm-3;Pn3=Pn-3;Fm3=Fm-3;Fd3=Fd-3;Im3=Im-3;Pa3=Pa-3;Ia3=Ia-3;Pm3m=Pm-3m;Pn3n=Pn-3n;Pm3n=Pm-3n;Pn3m=Pn-3m;Fm3m=Fm-3m;Fm3c=Fm-3c;Fd3m=Fd-3m;Fd3c=Fd-3c;Im3m=Im-3m;Ia3d=Ia-3d;" |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
CELL |
5 |
static final int |
END |
35 |
static final int |
LATT |
20 |
static final int |
NDIM |
10 |
static final int |
QI |
15 |
static final java.lang.String |
records |
"tit cell ndim qi lat sym spg end wma" |
static final int |
SPG |
30 |
static final int |
SYM |
25 |
static final int |
TITLE |
0 |
public static final java.lang.String |
U_LIST |
"U11U22U33U12U13U23UISO" |
static final int |
WMATRIX |
40 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
BLOCK_ATOMS |
1 |
private static final int |
BLOCK_CALC |
0 |
private static final int |
BLOCK_MAGRES |
2 |
private static final int |
BLOCK_NEW |
-2 |
private static final int |
BLOCK_NONE |
-1 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
unsupportedRecordTypes |
";ZERR;DISP;UNIT;LAUE;REM;MORE;TIME;HKLF;OMIT;SHEL;BASF;TWIN;EXTI;SWAT;HOPE;MERG;SPEC;RESI;MOVE;ANIS;AFIX;HFIX;FRAG;FEND;EXYZ;EXTI;EADP;EQIV;CONN;PART;BIND;FREE;DFIX;DANG;BUMP;SAME;SADI;CHIV;FLAT;DELU;SIMU;DEFS;ISOR;NCSY;SUMP;L.S.;CGLS;BLOC;DAMP;STIR;WGHT;FVAR;BOND;CONF;MPLA;RTAB;HTAB;LIST;ACTA;SIZE;TEMP;WPDB;FMAP;GRID;PLAN;MOLE;" |
Modifier and Type | Constant Field | Value |
---|---|---|
private final java.lang.String |
cxyz |
" x y z" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
GLOBAL_CONECT |
3 |
public static final int |
GLOBAL_DOMAINS |
5 |
public static final int |
GLOBAL_FRACTCOORD |
0 |
public static final int |
GLOBAL_ISPDB |
4 |
public static final int |
GLOBAL_SYMMETRY |
1 |
public static final int |
GLOBAL_UNITCELLS |
2 |
public static final int |
GLOBAL_VALIDATIONS |
6 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final float |
ANGSTROMS_PER_BOHR |
0.529177188873291f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
classBase |
"org.jmol.adapter.readers." |
private static final java.lang.String |
CML_NAMESPACE_URI |
"http://www.xml-cml.org/schema" |
private static final int |
LEADER_CHAR_MAX |
64 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final java.lang.String |
PATH_KEY |
".PATH" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
PARTICLE_CHAIN |
1 |
private static final int |
PARTICLE_NONE |
0 |
private static final int |
PARTICLE_SYMOP |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
ORDER_AROMATIC |
515 |
public static final int |
ORDER_AROMATIC_DOUBLE |
514 |
public static final int |
ORDER_AROMATIC_SINGLE |
513 |
public static final int |
ORDER_COVALENT_DOUBLE |
2 |
public static final int |
ORDER_COVALENT_SINGLE |
1 |
public static final int |
ORDER_COVALENT_TRIPLE |
3 |
public static final int |
ORDER_HBOND |
2048 |
public static final int |
ORDER_PARTIAL01 |
33 |
public static final int |
ORDER_PARTIAL12 |
66 |
public static final int |
ORDER_PARTIAL23 |
97 |
public static final int |
ORDER_PARTIAL32 |
100 |
public static final int |
ORDER_PYMOL_MULT |
98304 |
public static final int |
ORDER_PYMOL_SINGLE |
65536 |
public static final int |
ORDER_STEREO_FAR |
1041 |
public static final int |
ORDER_STEREO_NEAR |
1025 |
public static final int |
ORDER_UNSPECIFIED |
17 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
DATA_TYPE_AF |
1 |
public static final int |
DATA_TYPE_AFF |
2 |
public static final int |
DATA_TYPE_AFFF |
3 |
public static final int |
DATA_TYPE_STRING |
0 |
public static final int |
DATA_TYPE_UNKNOWN |
-1 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
HAS_CLIENT |
2 |
public static final int |
HAS_DRIVER |
4 |
public static final int |
OK |
1 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
MODE_FILL_COORDS |
1 |
public static final int |
MODE_FILL_MODEL |
0 |
public static final int |
MODE_FILL_MOLECULES |
4 |
public static final int |
MODE_FILL_MULTIMODEL |
16 |
public static final int |
MODE_FILL_RADII |
2 |
public static final int |
MODE_GET_ATTACHED_HYDROGENS |
8 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
leafCountMax |
2 |
static final int |
MAX_TREE_DEPTH |
100 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final byte |
PALETTE_ALTLOC |
14 |
public static final byte |
PALETTE_AMINO |
8 |
public static final byte |
PALETTE_CHAIN |
10 |
public static final byte |
PALETTE_CPK |
1 |
public static final byte |
PALETTE_ENERGY |
19 |
public static final byte |
PALETTE_FIXEDTEMP |
5 |
public static final byte |
PALETTE_FORMAL_CHARGE |
3 |
public static final byte |
PALETTE_GROUP |
75 |
public static final byte |
PALETTE_INSERTION |
15 |
public static final byte |
PALETTE_JMOL |
16 |
public static final byte |
PALETTE_MOLECULE |
77 |
public static final byte |
PALETTE_MONOMER |
76 |
public static final byte |
PALETTE_NONE |
0 |
public static final byte |
PALETTE_PARTIAL_CHARGE |
2 |
public static final byte |
PALETTE_POLYMER |
87 |
public static final byte |
PALETTE_PROPERTY |
84 |
public static final byte |
PALETTE_RASMOL |
17 |
public static final byte |
PALETTE_SHAPELY |
9 |
public static final byte |
PALETTE_STRAIGHTNESS |
86 |
public static final byte |
PALETTE_STRUCTURE |
7 |
public static final byte |
PALETTE_SURFACE |
70 |
public static final byte |
PALETTE_TEMP |
68 |
public static final byte |
PALETTE_TYPE |
18 |
public static final byte |
PALETTE_VARIABLE |
85 |
public static final byte |
PALETTE_VOLATILE |
64 |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final float |
degreesPerRadian |
57.295780181884766f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final boolean |
debug |
false |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
VISIBILITY_CLIPPED |
1 |
private static final int |
VISIBILITY_OFFSCREEN |
2 |
private static final int |
VISIBILITY_UNCLIPPED |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
maxOddSizeSphere |
49 |
static final int |
maxSphereDiameter |
1000 |
static final int |
maxSphereDiameter2 |
2000 |
private static final int |
SHADE_SLAB_CLIPPED |
47 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
DEFAULT |
64 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final java.lang.String |
JPEG_CONTINUE_STRING |
" #Jmol...\u0000" |
public static final java.lang.String |
PMESH_BINARY_MAGIC_NUMBER |
"PM\u0001\u0000" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
DELPHI_BINARY_MAGIC_NUMBER |
"\u0014\u0000\u0000\u0000" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
ADDRESS_BITS_PER_WORD |
6 |
private static final int |
BITS_PER_WORD |
64 |
private static final long |
WORD_MASK |
-1L |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final int |
MODE_CUBE |
1 |
protected static final int |
MODE_JVXL |
2 |
protected static final int |
MODE_PLANES |
3 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
CONTOUR_POINT |
-1 |
public static final int |
defaultContourCount |
9 |
public static final int |
EDGE_POINT |
-3 |
private static final int |
nContourMax |
100 |
public static final int |
VERTEX_POINT |
-2 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
CONTOUR_BITSET |
1 |
public static final int |
CONTOUR_COLIX |
3 |
public static final int |
CONTOUR_COLOR |
4 |
public static final int |
CONTOUR_FDATA |
5 |
public static final int |
CONTOUR_NPOLYGONS |
0 |
public static final int |
CONTOUR_POINTS |
6 |
public static final int |
CONTOUR_VALUE |
2 |
public static final int |
defaultColorFractionBase |
35 |
public static final int |
defaultColorFractionRange |
90 |
public static final int |
defaultEdgeFractionBase |
35 |
public static final int |
defaultEdgeFractionRange |
90 |
public static final java.lang.String |
JVXL_VERSION_XML |
"2.3" |
public static final java.lang.String |
JVXL_VERSION1 |
"2.0" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
MODE_GET_COLOR_INDEXES |
2 |
public static final int |
MODE_GET_VERTICES |
1 |
public static final int |
MODE_PUT_SETS |
3 |
public static final int |
MODE_PUT_VERTICES |
4 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
TYPE_DIFF |
2 |
private static final int |
TYPE_DIFF_PAIR |
4 |
private static final int |
TYPE_FUNCTION |
0 |
private static final int |
TYPE_MAX |
3 |
private static final int |
TYPE_SUM |
1 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
A0 |
0.52918 |
private static final float |
ATOMIC_ORBITAL_ZERO_CUT_OFF |
1.0000000116860974E-7f |
private static final double |
ROOT2 |
1.414214 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
POINTS_ALL |
0 |
private static final int |
POINTS_HETS |
4 |
private static final int |
POINTS_MCMC |
1 |
private static final int |
POINTS_MCSC |
3 |
private static final int |
POINTS_SCSC |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final float |
ANGSTROMS_PER_BOHR |
0.529177188873291f |
static final int |
defaultColorFractionBase |
35 |
static final int |
defaultColorFractionRange |
90 |
static final int |
defaultColorNegative |
-65536 |
static final int |
defaultColorNegativeLCAO |
-8388480 |
static final int |
defaultColorPositive |
-16776961 |
static final int |
defaultColorPositiveLCAO |
-23296 |
static final int |
defaultContourCount |
11 |
static final float |
defaultCutoff |
0.019999999552965164f |
static final int |
defaultEdgeFractionBase |
35 |
static final int |
defaultEdgeFractionRange |
90 |
static final float |
defaultLobeCutoff |
0.14000000059604645f |
static final float |
defaultMappedDataMax |
1.0f |
static final float |
defaultMappedDataMin |
0.0f |
static final float |
defaultMepCutoff |
0.10000000149011612f |
static final float |
defaultMepMax |
0.10000000149011612f |
static final float |
defaultMepMin |
-0.10000000149011612f |
static final float |
defaultOrbitalCutoff |
0.03999999910593033f |
static final float |
defaultOrbitalCutoffOld |
0.14000000059604645f |
static final float |
defaultQMElectronDensityCutoff |
0.009999999776482582f |
public static final float |
defaultQMOrbitalCutoff |
0.05000000074505806f |
static final float |
defaultSolventRadius |
1.2000000476837158f |
static final int |
HAS_MAXGRID |
256 |
static final int |
IS_POINTMAPPABLE |
512 |
static final int |
IS_SILENT |
64 |
static final int |
IS_SLABBABLE |
1024 |
public static final int |
IS_SOLVENTTYPE |
128 |
public static final int |
MEP_MAX_GRID |
40 |
public static final int |
MO_MAX_GRID |
80 |
static final int |
nContourMax |
100 |
static final int |
NO_ANISOTROPY |
32 |
static final int |
QM_TYPE_GAUSSIAN |
1 |
static final int |
QM_TYPE_NCI_PRO |
3 |
static final int |
QM_TYPE_NCI_SCF |
4 |
static final int |
QM_TYPE_SLATER |
2 |
static final int |
QM_TYPE_UNKNOWN |
0 |
static final int |
QM_TYPE_VOLUME_DATA |
5 |
public static final int |
STATE_DATA_COLORED |
3 |
public static final int |
STATE_DATA_READ |
2 |
public static final int |
STATE_INITIALIZED |
1 |
public static final int |
STATE_UNINITIALIZED |
0 |
static final int |
SURFACE_ATOMICORBITAL |
1294 |
static final int |
SURFACE_ELLIPSOID2 |
66 |
static final int |
SURFACE_ELLIPSOID3 |
67 |
static final int |
SURFACE_FUNCTIONXY |
8 |
static final int |
SURFACE_FUNCTIONXYZ |
9 |
static final int |
SURFACE_GEODESIC |
74 |
static final int |
SURFACE_INTERSECT |
1333 |
static final int |
SURFACE_LCAOCARTOON |
69 |
static final int |
SURFACE_LOBE |
68 |
public static final int |
SURFACE_LONEPAIR |
70 |
static final int |
SURFACE_MEP |
1328 |
static final int |
SURFACE_MLP |
1329 |
static final int |
SURFACE_MOLECULAR |
1203 |
static final int |
SURFACE_MOLECULARORBITAL |
1837 |
static final int |
SURFACE_NCI |
1844 |
static final int |
SURFACE_NOMAP |
1205 |
static final int |
SURFACE_NONE |
0 |
static final int |
SURFACE_PROPERTY |
1206 |
public static final int |
SURFACE_RADICAL |
71 |
static final int |
SURFACE_SASURFACE |
1196 |
static final int |
SURFACE_SOLVENT |
1195 |
static final int |
SURFACE_SPHERE |
65 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
cMapSourceBRIX |
6 |
static final int |
cMapSourceCCP4 |
2 |
static final int |
cMapSourceChempyBrick |
8 |
static final int |
cMapSourceCrystallographic |
1 |
static final int |
cMapSourceDesc |
4 |
static final int |
cMapSourceFLD |
5 |
static final int |
cMapSourceGeneralPurpose |
3 |
static final int |
cMapSourceGRD |
7 |
static final int |
cMapSourceObsolete |
10 |
static final int |
cMapSourceVMDPlugin |
9 |
static final int |
OBJECT_MAPDATA |
2 |
static final int |
OBJECT_MAPMESH |
3 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final float |
ANGSTROMS_PER_BOHR |
0.529177188873291f |
static final float |
defaultCutoff |
0.019999999552965164f |
static final float |
defaultMappedDataMax |
1.0f |
static final float |
defaultMappedDataMin |
0.0f |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final double |
DEG_TO_RAD |
0.017453292519943295 |
static final double |
max_squarable_double |
1.0E150 |
static final double |
min_squarable_double |
1.0E-150 |
public static final double |
RAD_TO_DEG |
57.29577951308232 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
CALC_ANGLE |
1 |
static final int |
CALC_DISTANCE |
0 |
static final int |
CALC_ES |
6 |
static final int |
CALC_MAX |
7 |
static final int |
CALC_OOP |
4 |
static final int |
CALC_STRETCH_BEND |
2 |
static final int |
CALC_TORSION |
3 |
static final int |
CALC_VDW |
5 |
public static final double |
DEG_TO_RAD |
0.017453292519943295 |
static final double |
KCAL_TO_KJ |
4.1868 |
private static final double |
PI_OVER_2 |
1.5707963267948966 |
public static final double |
RAD_TO_DEG |
57.29577951308232 |
private static final double |
TWO_PI |
6.283185307179586 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
DA_D |
68 |
public static final int |
DA_DA |
133 |
static final double |
FPAR |
143.9325 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final double |
KCAL22 |
92.1096 |
static final double |
KCAL332 |
1390.2842991599998 |
static final double |
KCAL44 |
184.2192 |
static final double |
KCAL6 |
25.1208 |
static final double |
KCAL644 |
2696.8016159999997 |
static final int |
PAR_D |
3 |
static final int |
PAR_HARD |
9 |
static final int |
PAR_R |
0 |
static final int |
PAR_RADIUS |
10 |
static final int |
PAR_THETA |
1 |
static final int |
PAR_U |
7 |
static final int |
PAR_V |
6 |
static final int |
PAR_X |
2 |
static final int |
PAR_XI |
8 |
static final int |
PAR_Z |
5 |
static final int |
PAR_ZETA |
4 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
ABI_IJ |
3 |
public static final int |
ABI_JK |
4 |
static final int |
EANGLE |
4 |
static final int |
EBOND |
2 |
static final int |
EELECTROSTATIC |
128 |
static final int |
ENERGY |
1 |
static final int |
EOOP |
32 |
static final int |
ESTRBND |
8 |
static final int |
ETORSION |
16 |
static final int |
EVDW |
64 |
public static final int |
R3 |
0 |
public static final int |
R4 |
1 |
public static final int |
R5 |
2 |
public static final int |
R56 |
3 |
public static final int |
TBI_AB |
4 |
public static final int |
TBI_BC |
5 |
public static final int |
TBI_CD |
6 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
A4_BNDK |
123 |
private static final int |
A4_CHRG |
124 |
private static final int |
A4_SB |
125 |
private static final int |
A4_SBDEF |
126 |
private static final int |
A4_VDW |
122 |
private static final int |
KEY_BNDK |
0 |
private static final int |
KEY_OOP |
6 |
private static final int |
KEY_PBCI |
0 |
private static final int |
KEY_SBDEF |
0 |
private static final int |
KEY_VDW |
0 |
private static final java.lang.String |
names |
"END.BCI.CHG.ANG.NDK.OND.OOP.TBN.FSB.TOR.VDW." |
private static final int |
TYPE_ANGLE |
5 |
private static final int |
TYPE_BNDK |
546 |
private static final int |
TYPE_BOND |
3 |
private static final int |
TYPE_CHRG |
34 |
private static final int |
TYPE_OOP |
13 |
private static final int |
TYPE_PBCI |
1 |
private static final int |
TYPE_SB |
21 |
private static final int |
TYPE_SBDEF |
37 |
private static final int |
TYPE_TORSION |
9 |
private static final int |
TYPE_VDW |
17 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
PT_CHARGE |
5 |
private static final int |
PT_CONNECT |
6 |
private static final int |
PT_ELEMENT |
2 |
private static final int |
TOKEN_AROMATIC |
3 |
private static final int |
TOKEN_ELEMENT_ALLYLIC |
6 |
private static final int |
TOKEN_ELEMENT_CHARGED |
1 |
private static final int |
TOKEN_ELEMENT_CONNECTED |
2 |
private static final int |
TOKEN_ELEMENT_ONLY |
0 |
private static final int |
TOKEN_ELEMENT_SP |
4 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final double |
CB |
-0.006981317007977318 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final double |
CS |
-2.0 |
static final double |
CS2 |
2.3333333333333335 |
static final double |
FSTRETCH |
71.96625 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
BUFF |
0.05 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final double |
FOOP |
71.96568080495746 |
static final double |
FOOPD |
2.5120761569715815 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
MENU_NAME |
"modelkitMenu" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final byte |
FLAG_MASK |
3 |
private static final byte |
IS_HETERO_FLAG |
2 |
public static final float |
RADIUS_GLOBAL |
16.100000381469727f |
public static final int |
RADIUS_MAX |
16 |
private static final byte |
VIBRATION_VECTOR_FLAG |
1 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
almost180 |
2.9845130443573f |
public static final byte |
TAINT_ATOMNAME |
0 |
public static final byte |
TAINT_ATOMNO |
13 |
public static final byte |
TAINT_ATOMTYPE |
1 |
public static final byte |
TAINT_BONDINGRADIUS |
6 |
public static final byte |
TAINT_COORD |
2 |
public static final byte |
TAINT_ELEMENT |
3 |
public static final byte |
TAINT_FORMALCHARGE |
4 |
public static final byte |
TAINT_HYDROPHOBICITY |
5 |
public static final byte |
TAINT_MAX |
15 |
public static final byte |
TAINT_OCCUPANCY |
7 |
public static final byte |
TAINT_PARTIALCHARGE |
8 |
public static final byte |
TAINT_SEQID |
14 |
public static final byte |
TAINT_TEMPERATURE |
9 |
public static final byte |
TAINT_VALENCE |
10 |
public static final byte |
TAINT_VANDERWAALS |
11 |
public static final byte |
TAINT_VIBRATION |
12 |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final int |
BOND_GROWTH_INCREMENT |
250 |
protected static final int |
MAX_BONDS_LENGTH_TO_CACHE |
5 |
protected static final int |
MAX_NUM_TO_CACHE |
200 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
INSERTION_CODE_MASK |
127 |
private static final int |
SEQUENCE_NUMBER_FLAG |
128 |
private static final int |
SEQUENCE_NUMBER_SHIFT |
8 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
QConst |
-27888.0 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
labelTokenParams |
"AaBbCcDEefGgIiLlMmNnOoPpQqRrSsTtUuVvWXxxYyyZzz%%%gqW" |
public static final java.lang.String |
STANDARD_LABEL |
"%[identify]" |
private static final java.lang.String |
twoCharLabelTokenParams |
"fuv" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
NMR_DC |
1 |
public static final int |
NMR_JC |
2 |
public static final int |
NMR_NOT |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
defaultGroupCount |
32 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
beta |
0.296705961227417f |
private static final byte |
C |
3 |
private static final byte |
CA |
0 |
private static final byte |
N |
2 |
private static final byte |
O |
1 |
private static final byte |
OT |
4 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
maxHbondAlphaDistance |
9.0f |
private static final float |
maxHbondAlphaDistance2 |
81.0f |
private static final float |
minimumHbondDistance2 |
0.25f |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final int |
TYPE_AMINO |
1 |
protected static final int |
TYPE_CARBOHYDRATE |
3 |
protected static final int |
TYPE_NOBONDING |
0 |
protected static final int |
TYPE_NUCLEIC |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final byte |
C1P |
25 |
private static final byte |
C2 |
5 |
private static final byte |
C2P |
26 |
private static final byte |
C3P |
22 |
private static final byte |
C4 |
7 |
private static final byte |
C4P |
27 |
private static final byte |
C5 |
3 |
private static final byte |
C5P |
29 |
static final byte |
C6 |
1 |
private static final byte |
C8 |
10 |
private static final byte |
H3T |
20 |
private static final byte |
H5T |
18 |
private static final byte |
N1 |
4 |
private static final byte |
N2 |
17 |
private static final byte |
N3 |
6 |
private static final byte |
N4 |
14 |
private static final byte |
N6 |
16 |
private static final byte |
N7 |
9 |
private static final byte |
N9 |
11 |
private static final byte |
NP |
15 |
private static final byte |
O1P |
23 |
private static final byte |
O2 |
8 |
private static final byte |
O2P |
24 |
private static final byte |
O2Pr |
2 |
private static final byte |
O3P |
21 |
private static final byte |
O4 |
12 |
private static final byte |
O4P |
28 |
private static final byte |
O5P |
19 |
private static final byte |
O6 |
13 |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final byte |
P |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
aaPlus |
"LYSN" |
private static final java.lang.String |
aaSp2 |
"ARGN;ASNN;ASNO;ASPO;GLNN;GLNO;GLUO;HISN;HISC;PHECTRPC;TRPN;TYRC" |
private static final java.lang.String |
allCarbohydrates |
",[AHR],[ALL],[AMU],[ARA],[ARB],[BDF],[BDR],[BGC],[BMA],[FCA],[FCB],[FRU],[FUC],[FUL],[GAL],[GLA],[GLC],[GXL],[GUP],[LXC],[MAN],[RAM],[RIB],[RIP],[XYP],[XYS],[CBI],[CT3],[CTR],[CTT],[LAT],[MAB],[MAL],[MLR],[MTT],[SUC],[TRE],[GCU],[MTL],[NAG],[NDG],[RHA],[SOR],[SOL],[SOE],[XYL],[A2G],[LBT],[NGA],[SIA],[SLB],[AFL],[AGC],[GLB],[NAN],[RAA]" |
private static final java.lang.String |
naNoH |
"A3;A1;C3;G3;I3" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
BIRTH |
0 |
public static final int |
CLICK |
3 |
public static final int |
CLICK_EVENT |
8 |
public static final int |
DBLCLK_EVENT |
5 |
public static final int |
DBLCLK_GESTURE |
6 |
public static final int |
DEATH |
1 |
public static final int |
DRAG_EVENT |
0 |
public static final int |
DRAG_GESTURE |
0 |
public static final int |
DRIVER_NONE |
-2 |
public static final int |
FLICK_EVENT |
6 |
public static final int |
FLICK_GESTURE |
7 |
public static final int |
INVALID_GESTURE |
9 |
public static final int |
MOVE |
2 |
public static final int |
MULTI_POINT_DRAG_GESTURE |
1 |
public static final int |
RELATIVE_DRAG_EVENT |
7 |
public static final int |
RELATIVE_DRAG_GESTURE |
8 |
public static final int |
ROTATE_EVENT |
1 |
public static final int |
ROTATE_GESTURE |
2 |
public static final int |
SERVICE_LOST |
-1 |
public static final int |
SPIN_EVENT |
2 |
public static final int |
SPIN_GESTURE |
3 |
public static final int |
TOUCH_EVENT |
3 |
public static final int |
TOUCH_GESTURE |
4 |
public static final int |
ZOOM_EVENT |
4 |
public static final int |
ZOOM_GESTURE |
5 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final long |
MAXIMUM_CLICK_TIME |
200L |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MENUITEM_HEIGHT |
20 |
private static final int |
UPDATE_ALL |
0 |
private static final int |
UPDATE_CONFIG |
1 |
protected static final int |
UPDATE_NEVER |
-1 |
private static final int |
UPDATE_SHOW |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
MENU_NAME |
"popupMenu" |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final int |
E_MINUS_D |
3 |
protected static final int |
E_MINUS_D_OVER_2 |
1 |
protected static final int |
ONE_OVER_D |
0 |
protected static final int |
ONE_OVER_ONE_PLUS_D |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
CUT |
-50.0 |
private static final double |
ROOT3 |
1.7320507764816284 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
NO_VALUE |
100.0 |
private static final int |
TYPE_ALL |
0 |
private static final int |
TYPE_INTER |
2 |
private static final int |
TYPE_INTRA |
1 |
private static final int |
TYPE_LIGAND |
3 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
DIPOLAR_FACTOR |
1054.5717253362893 |
private static final double |
e_charge |
1.60217646E-19 |
private static final double |
h_bar_planck |
1.0545717253362894E-34 |
private static final double |
h_planck |
6.62606957E-34 |
private static final double |
J_FACTOR |
0.0167840302932219 |
private static final int |
MAGNETOGYRIC_RATIO |
1 |
private static final double |
Q_FACTOR |
2.349647144641375E8 |
private static final int |
QUADRUPOLE_MOMENT |
2 |
private static final java.lang.String |
resource |
"nmr_data.txt" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
DC |
4 |
public static final int |
DS |
3 |
public static final int |
FC |
6 |
public static final int |
FS |
5 |
public static final int |
GC |
8 |
public static final int |
GS |
7 |
public static final int |
HC |
10 |
public static final int |
HS |
9 |
public static final int |
IC |
12 |
public static final int |
IS |
11 |
private static final int |
MAXID |
13 |
public static final int |
P |
1 |
public static final int |
S |
0 |
public static final int |
SP |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final float |
bohr_per_angstrom |
1.8897161483764648f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
ABSOLUTE_MIN_MESH_SIZE |
3 |
private static final int |
MIN_MESH_RENDER_SIZE |
8 |
private static final int |
MODE_ELLIPTICAL |
2 |
private static final int |
MODE_FLAT |
1 |
private static final int |
MODE_NONELLIPTICAL |
3 |
private static final int |
MODE_TUBE |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
arrowHeadBase |
4 |
private static final float |
arrowHeadOffset |
0.8999999761581421f |
private static final int |
arrowHeadTip |
5 |
private static final float |
arrowHeadWidthFactor |
2.0f |
private static final int |
center |
3 |
private static final int |
cross |
1 |
private static final int |
crossEnd |
2 |
private static final float |
crossOffset |
0.10000000149011612f |
private static final float |
crossWidth |
0.03999999910593033f |
private static final int |
cylinderBase |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
OPT_ARCS |
1 |
private static final int |
OPT_ARROWS |
5 |
private static final int |
OPT_AXES |
2 |
private static final int |
OPT_BALL |
4 |
private static final int |
OPT_COUNT |
7 |
private static final int |
OPT_DOTS |
0 |
private static final int |
OPT_FILL |
3 |
private static final int |
OPT_WIREFRAME |
6 |
private static final float |
toRadians |
0.01745329238474369f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
arrowHeadOffset |
-0.20000000298023224f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
commandDelay |
50 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
CONTINUE |
2 |
private static final int |
EOL |
3 |
private static final int |
ERROR |
4 |
private static final int |
OK |
0 |
private static final int |
OK2 |
1 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
PAUSE_DELAY |
-100 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
ERROR_axisExpected |
0 |
static final int |
ERROR_backgroundModelError |
1 |
public static final int |
ERROR_badArgumentCount |
2 |
static final int |
ERROR_badMillerIndices |
3 |
public static final int |
ERROR_badRGBColor |
4 |
static final int |
ERROR_booleanExpected |
5 |
static final int |
ERROR_booleanOrNumberExpected |
6 |
static final int |
ERROR_booleanOrWhateverExpected |
7 |
static final int |
ERROR_cannotSet |
56 |
static final int |
ERROR_colorExpected |
8 |
static final int |
ERROR_colorOrPaletteRequired |
9 |
static final int |
ERROR_commandExpected |
10 |
static final int |
ERROR_coordinateOrNameOrExpressionRequired |
11 |
static final int |
ERROR_drawObjectNotDefined |
12 |
public static final int |
ERROR_endOfStatementUnexpected |
13 |
public static final int |
ERROR_expressionExpected |
14 |
public static final int |
ERROR_expressionOrIntegerExpected |
15 |
static final int |
ERROR_filenameExpected |
16 |
public static final int |
ERROR_fileNotFoundException |
17 |
public static final int |
ERROR_incompatibleArguments |
18 |
public static final int |
ERROR_insufficientArguments |
19 |
static final int |
ERROR_integerExpected |
20 |
static final int |
ERROR_integerOutOfRange |
21 |
public static final int |
ERROR_invalidArgument |
22 |
public static final int |
ERROR_invalidParameterOrder |
23 |
public static final int |
ERROR_keywordExpected |
24 |
public static final int |
ERROR_moCoefficients |
25 |
public static final int |
ERROR_moIndex |
26 |
public static final int |
ERROR_moModelError |
27 |
public static final int |
ERROR_moOccupancy |
28 |
public static final int |
ERROR_moOnlyOne |
29 |
public static final int |
ERROR_multipleModelsDisplayedNotOK |
30 |
static final int |
ERROR_multipleModelsNotOK |
55 |
public static final int |
ERROR_noData |
31 |
public static final int |
ERROR_noPartialCharges |
32 |
static final int |
ERROR_noUnitCell |
33 |
public static final int |
ERROR_numberExpected |
34 |
static final int |
ERROR_numberMustBe |
35 |
static final int |
ERROR_numberOutOfRange |
36 |
static final int |
ERROR_objectNameExpected |
37 |
static final int |
ERROR_planeExpected |
38 |
static final int |
ERROR_propertyNameExpected |
39 |
static final int |
ERROR_spaceGroupNotFound |
40 |
static final int |
ERROR_stringExpected |
41 |
static final int |
ERROR_stringOrIdentifierExpected |
42 |
static final int |
ERROR_tooManyPoints |
43 |
static final int |
ERROR_tooManyScriptLevels |
44 |
static final int |
ERROR_unrecognizedAtomProperty |
45 |
static final int |
ERROR_unrecognizedBondProperty |
46 |
static final int |
ERROR_unrecognizedCommand |
47 |
static final int |
ERROR_unrecognizedExpression |
48 |
static final int |
ERROR_unrecognizedObject |
49 |
static final int |
ERROR_unrecognizedParameter |
50 |
static final int |
ERROR_unrecognizedParameterWarning |
51 |
static final int |
ERROR_unrecognizedShowParameter |
52 |
public static final int |
ERROR_what |
53 |
public static final int |
ERROR_writeWhat |
54 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
saveList |
"bonds? context? coordinates? orientation? rotation? selection? state? structure?" |
private static final int |
scriptLevelMax |
100 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
qMods |
" w:0 x:1 y:2 z:3 normal:4 eulerzxz:5 eulerzyz:6 vector:-1 theta:-2 axisx:-3 axisy:-4 axisz:-5 axisangle:-6 matrix:-9" |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final int |
ERROR_badArgumentCount |
0 |
protected static final int |
ERROR_badContext |
1 |
protected static final int |
ERROR_commandExpected |
2 |
private static final int |
ERROR_coordinateExpected |
3 |
protected static final int |
ERROR_endOfCommandUnexpected |
4 |
private static final int |
ERROR_endOfExpressionExpected |
5 |
private static final int |
ERROR_identifierOrResidueSpecificationExpected |
6 |
private static final int |
ERROR_invalidAtomSpecification |
7 |
private static final int |
ERROR_invalidChainSpecification |
8 |
protected static final int |
ERROR_invalidExpressionToken |
9 |
private static final int |
ERROR_invalidModelSpecification |
10 |
protected static final int |
ERROR_missingEnd |
11 |
private static final int |
ERROR_numberExpected |
12 |
private static final int |
ERROR_numberOrVariableNameExpected |
13 |
private static final int |
ERROR_residueSpecificationExpected |
14 |
protected static final int |
ERROR_tokenExpected |
15 |
protected static final int |
ERROR_tokenUnexpected |
16 |
private static final int |
ERROR_unrecognizedExpressionToken |
17 |
protected static final int |
ERROR_unrecognizedParameter |
18 |
protected static final int |
ERROR_unrecognizedToken |
19 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
FLAG_CANINCREMENT |
1 |
private static final int |
FLAG_MODIFIED |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
abs |
135266826 |
public static final int |
absolute |
1073741826 |
public static final int |
acos |
135266819 |
public static final int |
add |
1276118017 |
public static final int |
addhydrogens |
1073741828 |
public static final int |
adjust |
1073741830 |
public static final int |
adpmax |
1112539137 |
public static final int |
adpmin |
1112539138 |
public static final int |
align |
1073741832 |
public static final int |
all |
1048579 |
public static final int |
allconnected |
1073741834 |
public static final int |
allfloat |
256 |
public static final int |
allowembeddedscripts |
603979778 |
public static final int |
allowgestures |
603979780 |
public static final int |
allowkeystrokes |
603979781 |
public static final int |
allowmodelkit |
603979782 |
public static final int |
allowmoveatoms |
603979783 |
public static final int |
allowmultitouch |
603979784 |
public static final int |
allowrotateselected |
603979785 |
public static final int |
altloc |
1087373315 |
public static final int |
ambientocclusion |
553648129 |
public static final int |
ambientpercent |
553648130 |
public static final int |
amino |
3145730 |
public static final int |
andequals |
269484242 |
public static final int |
angle |
135266305 |
public static final int |
angstroms |
1073741836 |
public static final int |
animation |
4097 |
public static final int |
animationfps |
553648132 |
public static final int |
animationmode |
545259521 |
public static final int |
anisotropy |
1073741837 |
public static final int |
antialiasdisplay |
603979786 |
public static final int |
antialiasimages |
603979788 |
public static final int |
antialiastranslucent |
603979790 |
public static final int |
append |
1073741839 |
public static final int |
appendnew |
603979792 |
public static final int |
appletproxy |
545259522 |
public static final int |
applysymmetrytobonds |
603979794 |
public static final int |
arc |
1074790416 |
public static final int |
area |
1073741842 |
public static final int |
aromatic |
1076887572 |
public static final int |
array |
135266306 |
public static final int |
arrow |
1073741846 |
public static final int |
as |
1073741848 |
public static final int |
assign |
4098 |
public static final int |
async |
1073741849 |
public static final int |
atomExpressionCommand |
12288 |
public static final int |
atomicorbital |
1073741850 |
public static final int |
atomid |
1095761922 |
public static final int |
atomindex |
1095761923 |
public static final int |
atomname |
1087375362 |
public static final int |
atomno |
1095763969 |
public static final int |
atompicking |
603979796 |
public static final int |
atomproperty |
1078984704 |
public static final int |
atoms |
1141899265 |
public static final int |
atomtype |
1087375361 |
public static final int |
atomtypes |
545259524 |
public static final int |
atomx |
1112541185 |
public static final int |
atomy |
1112541186 |
public static final int |
atomz |
1112541187 |
public static final int |
auto |
1073741852 |
public static final int |
autobond |
603979798 |
public static final int |
autofps |
603979800 |
public static final int |
average |
96 |
public static final int |
axes |
1611272194 |
public static final int |
axescolor |
545259526 |
public static final int |
axesmode |
553648134 |
public static final int |
axesmolecular |
603979804 |
public static final int |
axesorientationrasmol |
603979806 |
public static final int |
axesscale |
570425346 |
public static final int |
axesunitcell |
603979808 |
public static final int |
axeswindow |
603979810 |
public static final int |
axis |
1073741854 |
public static final int |
axis1color |
545259528 |
public static final int |
axis2color |
545259530 |
public static final int |
axis3color |
545259532 |
public static final int |
axisangle |
135266307 |
public static final int |
babel |
1073741856 |
public static final int |
babel21 |
1073741858 |
public static final int |
back |
1073741859 |
public static final int |
backbone |
1115297793 |
public static final int |
backbonesteps |
603979811 |
public static final int |
background |
1610616835 |
public static final int |
backgroundcolor |
545259534 |
public static final int |
backgroundmodel |
536870914 |
public static final int |
backlit |
1073741862 |
public static final int |
balls |
1073741860 |
public static final int |
barb |
1073741861 |
public static final int |
barray |
15 |
public static final int |
basemodel |
3145776 |
public static final int |
basepair |
1073741864 |
public static final int |
best |
1073741863 |
public static final int |
bin |
1276118529 |
public static final int |
binary |
1073741866 |
public static final int |
bind |
4100 |
public static final int |
bitset |
10 |
public static final int |
blockdata |
1073741868 |
public static final int |
bondcount |
1095761924 |
public static final int |
bondingradius |
1112541194 |
public static final int |
bondingversion |
553648138 |
public static final int |
bondmode |
1610612737 |
public static final int |
bondmodeor |
603979812 |
public static final int |
bondorder |
4101 |
public static final int |
bondpicking |
603979814 |
public static final int |
bondradiusmilliangstroms |
553648136 |
public static final int |
bonds |
1678770178 |
public static final int |
bondset |
1073741870 |
public static final int |
bondtolerance |
570425348 |
public static final int |
booleanparam |
603979776 |
public static final int |
bottom |
1073741871 |
public static final int |
boundbox |
1679429641 |
public static final int |
boundboxcolor |
545259536 |
public static final int |
branch |
1048580 |
public static final int |
breakcmd |
102407 |
public static final int |
brillouin |
1073741872 |
public static final int |
cache |
135270423 |
public static final int |
calculate |
4102 |
public static final int |
cameradepth |
570425350 |
public static final int |
cancel |
1073741874 |
public static final int |
cap |
1074790451 |
public static final int |
capture |
4103 |
public static final int |
carbohydrate |
3145764 |
public static final int |
cartoon |
1113200642 |
public static final int |
cartoonbaseedges |
603979816 |
public static final int |
cartoonladders |
603979818 |
public static final int |
cartoonribose |
603979819 |
public static final int |
cartoonrockets |
603979820 |
public static final int |
cartoonsfancy |
603979817 |
public static final int |
casecmd |
102411 |
public static final int |
catchcmd |
102412 |
public static final int |
cavity |
1073741876 |
public static final int |
cd |
1069064 |
public static final int |
cell |
1095761925 |
public static final int |
celshading |
603979822 |
public static final int |
celshadingpower |
553648137 |
public static final int |
center |
12289 |
public static final int |
centerat |
4105 |
public static final int |
centroid |
1095761926 |
public static final int |
cgo |
135174 |
public static final int |
chain |
1087373316 |
public static final int |
chaincasesensitive |
603979823 |
public static final int |
chainno |
1095761927 |
public static final int |
check |
1073741878 |
public static final int |
chemical |
1073741879 |
public static final int |
chemicalshift |
1112539139 |
public static final int |
circle |
1073741880 |
public static final int |
clash |
1073741881 |
public static final int |
clear |
1073741882 |
public static final int |
clickable |
3145766 |
public static final int |
clipboard |
1073741884 |
public static final int |
col |
1276117514 |
public static final int |
collapsed |
1073741886 |
public static final int |
colon |
269484066 |
public static final int |
color |
1766856708 |
public static final int |
colorrasmol |
603979824 |
public static final int |
colorscheme |
1073741888 |
public static final int |
comma |
269484080 |
public static final int |
command |
1073741890 |
public static final int |
commands |
1073741892 |
public static final int |
comparator |
269484288 |
public static final int |
compare |
135270405 |
public static final int |
configuration |
1095766024 |
public static final int |
connect |
4106 |
public static final int |
connected |
135266310 |
public static final int |
console |
528395 |
public static final int |
constraint |
1073741894 |
public static final int |
contact |
135402505 |
public static final int |
context |
14 |
public static final int |
continuecmd |
102408 |
public static final int |
contour |
1073741896 |
public static final int |
contourlines |
1073741898 |
public static final int |
contours |
1073741900 |
public static final int |
coord |
1048581 |
public static final int |
corners |
1073741902 |
public static final int |
cos |
135266821 |
public static final int |
count |
1276117012 |
public static final int |
covalentradius |
1112539140 |
public static final int |
create |
1073741904 |
public static final int |
criterion |
1073741905 |
public static final int |
cross |
135267329 |
public static final int |
crossed |
1073741906 |
public static final int |
currentlocalpath |
545259538 |
public static final int |
curve |
1073741908 |
public static final int |
cutoff |
1073741910 |
public static final int |
cylinder |
1073741912 |
public static final int |
data |
135270408 |
public static final int |
dataseparator |
545259540 |
public static final int |
debug |
536870916 |
public static final int |
debugscript |
603979825 |
public static final int |
decimal |
3 |
public static final int |
defaultanglelabel |
545259542 |
public static final int |
defaultcmd |
102413 |
public static final int |
defaultcolorscheme |
545259545 |
public static final int |
defaultdirectory |
545259546 |
public static final int |
defaultdistancelabel |
545259547 |
public static final int |
defaultdrawarrowscale |
570425352 |
public static final int |
defaultdropscript |
545259548 |
public static final int |
defaultlabelpdb |
545259543 |
public static final int |
defaultlabelxyz |
545259544 |
public static final int |
defaultlattice |
536870918 |
public static final int |
defaultloadfilter |
545259549 |
public static final int |
defaultloadscript |
545259550 |
public static final int |
defaultON |
524288 |
public static final int |
defaults |
545259552 |
public static final int |
defaultstructuredssp |
603979826 |
public static final int |
defaulttorsionlabel |
545259554 |
public static final int |
defaulttranslucent |
570425354 |
public static final int |
defaultvdw |
545259555 |
public static final int |
define |
1060866 |
public static final int |
delay |
528397 |
public static final int |
delaymaximumms |
553648140 |
public static final int |
delete |
12291 |
public static final int |
density |
1073741914 |
public static final int |
deprecatedparam |
1610612736 |
public static final int |
depth |
554176526 |
public static final int |
diameter |
1073741917 |
public static final int |
diffusepercent |
553648142 |
public static final int |
dipole |
135175 |
public static final int |
dipolescale |
570425355 |
public static final int |
direction |
1073741918 |
public static final int |
disablepopupmenu |
603979827 |
public static final int |
discrete |
1073741920 |
public static final int |
displacement |
1073741922 |
public static final int |
display |
1610625028 |
public static final int |
displaycellparameters |
603979828 |
public static final int |
displayed |
3145768 |
public static final int |
distance |
1276118018 |
public static final int |
distancefactor |
1073741924 |
public static final int |
div |
1276117504 |
public static final int |
divide |
269484208 |
public static final int |
dna |
3145732 |
public static final int |
dollarsign |
1048582 |
public static final int |
domains |
1073741925 |
public static final int |
dot |
1276117505 |
public static final int |
dotdensity |
553648143 |
public static final int |
dots |
1113198595 |
public static final int |
dotscale |
553648144 |
public static final int |
dotsselectedonly |
603979829 |
public static final int |
dotsurface |
603979830 |
public static final int |
dotted |
1073741926 |
public static final int |
downsample |
1073741928 |
public static final int |
dragselected |
603979831 |
public static final int |
draw |
135176 |
public static final int |
drawfontsize |
570425356 |
public static final int |
drawhover |
603979832 |
public static final int |
drawing |
1073741929 |
public static final int |
drawpicking |
603979833 |
public static final int |
dssp |
1073741915 |
public static final int |
dsspcalchydrogen |
603979834 |
public static final int |
dssr |
1073741916 |
public static final int |
dynamicmeasurements |
603979835 |
public static final int |
eccentricity |
1073741931 |
public static final int |
echo |
537022465 |
public static final int |
ed |
1074790508 |
public static final int |
edges |
1073741933 |
public static final int |
edsurlcutoff |
545259556 |
public static final int |
edsurlformat |
545259557 |
public static final int |
edsurlformatdiff |
545259558 |
public static final int |
element |
1087375365 |
public static final int |
elemisono |
1095761929 |
public static final int |
elemno |
1095763978 |
public static final int |
ellipsoid |
1113198596 |
public static final int |
ellipsoidarcs |
603979836 |
public static final int |
ellipsoidarrows |
603979837 |
public static final int |
ellipsoidaxes |
603979838 |
public static final int |
ellipsoidaxisdiameter |
570425357 |
public static final int |
ellipsoidball |
603979839 |
public static final int |
ellipsoiddotcount |
553648145 |
public static final int |
ellipsoiddots |
603979840 |
public static final int |
ellipsoidfill |
603979841 |
public static final int |
elsecmd |
364547 |
public static final int |
elseif |
102402 |
public static final int |
end |
1150985 |
public static final int |
endifcmd |
364548 |
public static final int |
energy |
1073741934 |
public static final int |
energyunits |
545259559 |
public static final int |
error |
1073741935 |
public static final int |
eta |
1112539141 |
public static final int |
eval |
135266829 |
public static final int |
exit |
266255 |
public static final int |
exitjmol |
266256 |
public static final int |
exportscale |
570425358 |
public static final int |
expression |
1048576 |
public static final int |
expressionBegin |
1048577 |
public static final int |
expressionEnd |
1048578 |
public static final int |
facecenteroffset |
1073741937 |
public static final int |
file |
1229984263 |
public static final int |
filecachedirectory |
545259560 |
public static final int |
filecaching |
603979842 |
public static final int |
fill |
1073741938 |
public static final int |
filter |
1073741940 |
public static final int |
find |
1276118531 |
public static final int |
first |
1073741942 |
public static final int |
fixed |
1060869 |
public static final int |
fixedtemp |
1073741946 |
public static final int |
flat |
1073741948 |
public static final int |
floatparam |
570425344 |
public static final int |
floatproperty |
1112539136 |
public static final int |
flowCommand |
102400 |
public static final int |
font |
4114 |
public static final int |
fontcaching |
603979844 |
public static final int |
fontscaling |
603979845 |
public static final int |
fontsize |
1610612738 |
public static final int |
forceautobond |
603979846 |
public static final int |
forcefield |
545259561 |
public static final int |
forcmd |
135369224 |
public static final int |
formalcharge |
1632634891 |
public static final int |
format |
1288701959 |
public static final int |
fps |
1074790526 |
public static final int |
fractionalrelative |
603979848 |
public static final int |
fracx |
1112541188 |
public static final int |
fracxyz |
1146095627 |
public static final int |
fracy |
1112541189 |
public static final int |
fracz |
1112541190 |
public static final int |
frame |
4115 |
public static final int |
frank |
1611272202 |
public static final int |
from |
1073741952 |
public static final int |
front |
1073741954 |
public static final int |
frontedges |
1073741956 |
public static final int |
frontlit |
1073741958 |
public static final int |
frontonly |
1073741960 |
public static final int |
full |
1073741961 |
public static final int |
fullplane |
1073741962 |
public static final int |
fullylit |
1073741964 |
public static final int |
function |
135368713 |
public static final int |
functionxy |
1073741966 |
public static final int |
functionxyz |
1073741968 |
public static final int |
fux |
1112541191 |
public static final int |
fuxyz |
1146095629 |
public static final int |
fuy |
1112541192 |
public static final int |
fuz |
1112541193 |
public static final int |
geosurface |
1113198597 |
public static final int |
gestureswipefactor |
570425359 |
public static final int |
getproperty |
1276121098 |
public static final int |
gotocmd |
20500 |
public static final int |
greyscalerendering |
603979850 |
public static final int |
gridpoints |
1073741970 |
public static final int |
group |
1087373318 |
public static final int |
group1 |
1087373319 |
public static final int |
groupid |
1095761932 |
public static final int |
groupindex |
1095761933 |
public static final int |
halo |
1113200646 |
public static final int |
hash |
6 |
public static final int |
hbond |
1612189718 |
public static final int |
hbondsangleminimum |
570425360 |
public static final int |
hbondsbackbone |
603979852 |
public static final int |
hbondsdistancemaximum |
570425361 |
public static final int |
hbondsrasmol |
603979853 |
public static final int |
hbondssolid |
603979854 |
public static final int |
helix |
137363467 |
public static final int |
helix310 |
3145736 |
public static final int |
helixalpha |
3145735 |
public static final int |
helixpi |
3145738 |
public static final int |
helixstep |
553648146 |
public static final int |
help |
20482 |
public static final int |
helppath |
545259562 |
public static final int |
hermitelevel |
553648147 |
public static final int |
hetero |
1613758470 |
public static final int |
hidden |
3145770 |
public static final int |
hide |
12294 |
public static final int |
hidenameinpopup |
603979858 |
public static final int |
hidenavigationpoint |
603979860 |
public static final int |
hidenotselected |
603979862 |
public static final int |
highlight |
536870920 |
public static final int |
highresolution |
603979864 |
public static final int |
history |
1610616855 |
public static final int |
historylevel |
553648148 |
public static final int |
hkl |
135267841 |
public static final int |
homo |
1073741973 |
public static final int |
hover |
544771 |
public static final int |
hoverdelay |
570425362 |
public static final int |
hoverlabel |
545259563 |
public static final int |
hydrogen |
1613758476 |
public static final int |
hydrophobicity |
1114638362 |
public static final int |
id |
1074790550 |
public static final int |
identifier |
1073741824 |
public static final int |
identify |
1087373321 |
public static final int |
ifcmd |
135369225 |
public static final int |
ignore |
1073741976 |
public static final int |
image |
1073741979 |
public static final int |
imagestate |
603979867 |
public static final int |
implicitStringCommand |
20480 |
public static final int |
in |
1276116993 |
public static final int |
inchi |
1073741977 |
public static final int |
inchikey |
1073741978 |
public static final int |
increment |
1073741981 |
public static final int |
info |
1073741982 |
public static final int |
initialize |
266264 |
public static final int |
inline |
1073741983 |
public static final int |
insertion |
1087373322 |
public static final int |
insideout |
1073741984 |
public static final int |
integer |
2 |
public static final int |
interior |
1073741986 |
public static final int |
intermolecular |
1073741990 |
public static final int |
internal |
1073741988 |
public static final int |
intersection |
135267842 |
public static final int |
intparam |
553648128 |
public static final int |
intproperty |
1095761920 |
public static final int |
intramolecular |
1073741989 |
public static final int |
invertSelected |
4121 |
public static final int |
isaromatic |
1048585 |
public static final int |
iskiosk |
603979868 |
public static final int |
isosurface |
135180 |
public static final int |
isosurfacekey |
603979869 |
public static final int |
isosurfacepropertysmoothing |
603979870 |
public static final int |
isosurfacepropertysmoothingpower |
553648149 |
public static final int |
javascript |
135287308 |
public static final int |
jmol |
1073741991 |
public static final int |
join |
1276118020 |
public static final int |
json |
1073741992 |
public static final int |
justifymeasurements |
603979871 |
public static final int |
keys |
1141899282 |
private static final int |
keyword |
16 |
public static final int |
label |
1826248716 |
public static final int |
language |
545259564 |
public static final int |
languagetranslation |
603979872 |
public static final int |
last |
1073741993 |
public static final int |
lattice |
1073741994 |
public static final int |
lcaocartoon |
135182 |
public static final int |
leadatom |
3145741 |
public static final int |
left |
1073741996 |
public static final int |
leftbrace |
1048586 |
public static final int |
leftdivide |
269484211 |
public static final int |
leftparen |
269484048 |
public static final int |
leftsquare |
269484096 |
public static final int |
legacyautobonding |
603979873 |
public static final int |
legacyhaddition |
603979874 |
public static final int |
legacyjavafloat |
603979875 |
public static final int |
length |
1141899267 |
public static final int |
lighting |
1073741995 |
public static final int |
line |
1073741998 |
public static final int |
linedata |
1073742000 |
public static final int |
lines |
1141899268 |
public static final int |
link |
1073741999 |
public static final int |
list |
1073742001 |
public static final int |
listf |
13 |
public static final int |
load |
135271427 |
public static final int |
loadatomdatatolerance |
570425363 |
public static final int |
loadformat |
545259565 |
public static final int |
loadligandformat |
545259566 |
public static final int |
lobe |
1073742002 |
public static final int |
log |
36869 |
public static final int |
logcommands |
603979876 |
public static final int |
logfile |
545259567 |
public static final int |
loggestures |
603979877 |
public static final int |
loglevel |
553648150 |
public static final int |
lonepair |
1073742004 |
public static final int |
loop |
528410 |
public static final int |
lp |
1073742006 |
public static final int |
lumo |
1073742008 |
public static final int |
magneticshielding |
1112539142 |
public static final int |
manifest |
1073742010 |
public static final int |
mapproperty |
1052700 |
public static final int |
mass |
1112539143 |
public static final int |
mathExpressionCommand |
36864 |
public static final int |
mathfunc |
135266304 |
public static final int |
mathop |
269484032 |
public static final int |
mathproperty |
1141899264 |
public static final int |
matrix3f |
11 |
public static final int |
matrix4f |
12 |
public static final int |
max |
64 |
public static final int |
maxset |
1073742014 |
public static final int |
measure |
1746538509 |
public static final int |
measureallmodels |
603979878 |
public static final int |
measurementlabels |
603979879 |
public static final int |
measurementnumbers |
1610612739 |
public static final int |
measurements |
537006096 |
public static final int |
measurementunits |
545259568 |
public static final int |
menu |
1073742015 |
public static final int |
mep |
1073742016 |
public static final int |
mesh |
1073742018 |
public static final int |
meshRibbon |
1113200647 |
public static final int |
meshscale |
553648151 |
public static final int |
message |
20485 |
public static final int |
messagestylechime |
603979880 |
public static final int |
middle |
1073742019 |
public static final int |
min |
32 |
public static final int |
minbonddistance |
570425364 |
public static final int |
minimizationcriterion |
570425365 |
public static final int |
minimizationrefresh |
603979881 |
public static final int |
minimizationsilent |
603979882 |
public static final int |
minimizationsteps |
553648152 |
public static final int |
minimize |
4126 |
public static final int |
minmaxmask |
480 |
public static final int |
minpixelselradius |
553648153 |
public static final int |
minset |
1073742020 |
public static final int |
minus |
269484192 |
public static final int |
minusMinus |
269484225 |
public static final int |
misc |
1073741824 |
public static final int |
mlp |
1073742022 |
public static final int |
mo |
1073877010 |
public static final int |
mode |
1073742024 |
public static final int |
model |
1095766030 |
public static final int |
modelbased |
1073742027 |
public static final int |
modelindex |
1095761935 |
public static final int |
modelkitmode |
603979883 |
public static final int |
modify |
1073742025 |
public static final int |
modifyorcreate |
1073742026 |
public static final int |
modo |
1112539162 |
public static final int |
modt1 |
1112539156 |
public static final int |
modt2 |
1112539157 |
public static final int |
modt3 |
1112539158 |
public static final int |
modulation |
1276121113 |
public static final int |
modulationscale |
570425366 |
public static final int |
modx |
1112539159 |
public static final int |
modxyz |
1146093584 |
public static final int |
mody |
1112539160 |
public static final int |
modz |
1112539161 |
public static final int |
molecular |
1073742028 |
public static final int |
molecule |
1095761936 |
public static final int |
monitorenergy |
603979884 |
public static final int |
monomer |
1073742029 |
public static final int |
morph |
1073742030 |
public static final int |
mouse |
1073742031 |
public static final int |
mousedragfactor |
570425367 |
public static final int |
mousewheelfactor |
570425368 |
public static final int |
move |
4128 |
public static final int |
moveto |
4130 |
public static final int |
movie |
1073742032 |
public static final int |
mrc |
1073742033 |
public static final int |
msms |
1073742034 |
public static final int |
mul |
1276117507 |
public static final int |
mul3 |
1276117508 |
public static final int |
multiplebondradiusfactor |
570425369 |
public static final int |
multiplebondspacing |
570425370 |
public static final int |
multiprocessor |
603979885 |
public static final int |
nada |
0 |
public static final int |
name |
1073742035 |
public static final int |
navfps |
570425371 |
public static final int |
navigate |
4131 |
public static final int |
navigatesurface |
603979886 |
public static final int |
navigationdepth |
570425372 |
public static final int |
navigationmode |
603979887 |
public static final int |
navigationperiodic |
603979888 |
public static final int |
navigationslab |
570425373 |
public static final int |
navigationspeed |
570425374 |
public static final int |
navx |
570425376 |
public static final int |
navy |
570425378 |
public static final int |
navz |
570425380 |
public static final int |
nbo |
1073877011 |
public static final int |
nci |
1073742036 |
public static final int |
next |
1073742037 |
public static final int |
nmr |
1073742038 |
public static final int |
nmrpredictformat |
545259569 |
public static final int |
nmrurlformat |
545259570 |
public static final int |
noArgs |
262144 |
public static final int |
nocontourlines |
1073742039 |
public static final int |
nocross |
1073742040 |
public static final int |
nodebug |
1073742041 |
public static final int |
nodots |
1073742042 |
public static final int |
noedges |
1073742044 |
public static final int |
nofill |
1073742046 |
public static final int |
nohead |
1073742048 |
public static final int |
noload |
1073742050 |
public static final int |
nomesh |
1073742052 |
public static final int |
none |
1048587 |
public static final int |
nonequivalent |
3145778 |
public static final int |
noplane |
1073742054 |
public static final int |
normal |
1073742056 |
public static final int |
notfrontonly |
1073742058 |
public static final int |
notriangles |
1073742060 |
public static final int |
now |
135266318 |
public static final int |
nucleic |
3145742 |
public static final int |
obj |
1073742062 |
public static final int |
object |
1073742064 |
public static final int |
occupancy |
1129318401 |
public static final int |
off |
1048588 |
public static final int |
offset |
1073742066 |
public static final int |
offsetside |
1073742068 |
public static final int |
omega |
1112539144 |
public static final int |
on |
1048589 |
public static final int |
once |
1073742070 |
public static final int |
only |
1073742072 |
public static final int |
opAnd |
269484128 |
public static final int |
opAND |
269484160 |
public static final int |
opaque |
1073742074 |
public static final int |
opEQ |
269484436 |
public static final int |
opGE |
269484433 |
public static final int |
opGT |
269484432 |
public static final int |
opIf |
806354977 |
public static final int |
opLE |
269484434 |
public static final int |
opLIKE |
269484438 |
public static final int |
opLT |
269484435 |
public static final int |
opNE |
269484437 |
public static final int |
opNot |
269484144 |
public static final int |
opOr |
269484112 |
public static final int |
options |
1073742075 |
public static final int |
opToggle |
269484114 |
public static final int |
opXor |
269484113 |
public static final int |
orbital |
1073742076 |
public static final int |
orientation |
1073742077 |
public static final int |
origin |
1073742078 |
public static final int |
out |
1073742079 |
public static final int |
packed |
1073742080 |
public static final int |
palindrome |
1073742082 |
public static final int |
parallel |
102436 |
public static final int |
parameters |
1073742083 |
public static final int |
paramTypes |
662700032 |
public static final int |
partialcharge |
1112541195 |
public static final int |
partialdots |
603979889 |
public static final int |
particleradius |
570425381 |
public static final int |
path |
1073742084 |
public static final int |
pathforallfiles |
545259571 |
public static final int |
pause |
20487 |
public static final int |
pdb |
1074790662 |
public static final int |
pdbaddhydrogens |
603979890 |
public static final int |
pdbgetheader |
603979891 |
public static final int |
pdbheader |
1073742088 |
public static final int |
pdbsequential |
603979892 |
public static final int |
per |
1048583 |
public static final int |
percent |
269484210 |
public static final int |
percentvdwatom |
553648154 |
public static final int |
period |
1073742090 |
public static final int |
perpendicular |
1073742092 |
public static final int |
perper |
1048584 |
public static final int |
perspectivedepth |
603979893 |
public static final int |
perspectivemodel |
553648155 |
public static final int |
phase |
1073742094 |
public static final int |
phi |
1112539145 |
public static final int |
phongexponent |
553648156 |
public static final int |
picking |
545259572 |
public static final int |
pickingspinrate |
553648157 |
public static final int |
pickingstyle |
545259574 |
public static final int |
picklabel |
545259576 |
public static final int |
plane |
135266319 |
public static final int |
platformspeed |
553648158 |
public static final int |
play |
1073742096 |
public static final int |
playrev |
1073742098 |
public static final int |
plot |
4133 |
public static final int |
plot3d |
135190 |
public static final int |
plus |
269484193 |
public static final int |
plusPlus |
269484226 |
public static final int |
pmesh |
135188 |
public static final int |
pocket |
1073742100 |
public static final int |
point |
135266320 |
public static final int |
point3f |
8 |
public static final int |
point4f |
9 |
public static final int |
pointgroup |
1073742102 |
public static final int |
pointgroupdistancetolerance |
570425382 |
public static final int |
pointgrouplineartolerance |
570425384 |
public static final int |
pointsperangstrom |
1073742104 |
public static final int |
polygon |
1073742106 |
public static final int |
polyhedra |
135192 |
public static final int |
polymer |
1095761937 |
public static final int |
polymerlength |
1095761938 |
public static final int |
pop |
1276383249 |
public static final int |
predefinedset |
3145728 |
public static final int |
preservestate |
603979894 |
public static final int |
prev |
1073742108 |
public static final int |
print |
36865 |
public static final int |
probe |
1073742109 |
public static final int |
process |
102439 |
public static final int |
prompt |
135304707 |
public static final int |
property |
1716520985 |
public static final int |
propertyatomnumbercolumncount |
553648160 |
public static final int |
propertyatomnumberfield |
553648159 |
public static final int |
propertycolorscheme |
545259578 |
public static final int |
propertydatacolumncount |
553648162 |
public static final int |
propertydatafield |
553648164 |
public static final int |
PROPERTYFLAGS |
1137704960 |
public static final int |
propselector |
269484241 |
public static final int |
protein |
3145744 |
public static final int |
psi |
1112539146 |
public static final int |
purine |
3145746 |
public static final int |
push |
1276384259 |
public static final int |
pymol |
1073742110 |
public static final int |
pyrimidine |
3145748 |
public static final int |
quaternion |
135270418 |
public static final int |
quaternionframe |
545259580 |
public static final int |
quit |
266281 |
public static final int |
rad |
1073742111 |
public static final int |
radical |
1073742112 |
public static final int |
radius |
1666189314 |
public static final int |
ramachandran |
1052714 |
public static final int |
random |
135267332 |
public static final int |
range |
1073742114 |
public static final int |
rangeselected |
603979895 |
public static final int |
rasmol |
1073742116 |
public static final int |
redomove |
4139 |
public static final int |
reference |
1073742118 |
public static final int |
refresh |
266284 |
public static final int |
refreshing |
603979896 |
public static final int |
remove |
1073742119 |
public static final int |
repaintwaitms |
553648165 |
public static final int |
replace |
1276120578 |
public static final int |
reset |
4141 |
public static final int |
residue |
1073742120 |
public static final int |
resno |
1095761939 |
public static final int |
resolution |
1073742122 |
public static final int |
restore |
4142 |
public static final int |
restrict |
12295 |
public static final int |
resume |
4143 |
public static final int |
returncmd |
36866 |
public static final int |
reverse |
1141899269 |
public static final int |
reversecolor |
1073742124 |
public static final int |
rewind |
1073742125 |
public static final int |
ribbon |
1113200649 |
public static final int |
ribbonaspectratio |
553648166 |
public static final int |
ribbonborder |
603979898 |
public static final int |
right |
1073742126 |
public static final int |
rightbrace |
1048590 |
public static final int |
rightparen |
269484049 |
public static final int |
rightsquare |
269484097 |
public static final int |
rmsd |
1073742127 |
public static final int |
rna |
3145750 |
public static final int |
rna3d |
1073742128 |
public static final int |
rock |
1073742129 |
public static final int |
rocket |
1113200650 |
public static final int |
rocketbarrels |
603979900 |
public static final int |
rotate |
528432 |
public static final int |
rotate45 |
1073742130 |
public static final int |
rotateSelected |
4145 |
public static final int |
rotation |
1073742132 |
public static final int |
rotationradius |
570425388 |
public static final int |
row |
1276117515 |
public static final int |
rubberband |
1073742134 |
public static final int |
sasurface |
1073742135 |
public static final int |
save |
4146 |
public static final int |
saved |
1073742136 |
public static final int |
saveproteinstructurestate |
603979902 |
public static final int |
scale |
1073742138 |
public static final int |
scale3d |
1610612740 |
public static final int |
scaleangstromsperinch |
570425390 |
public static final int |
scene |
1073742139 |
public static final int |
screenx |
1112539147 |
public static final int |
screenxyz |
1146095628 |
public static final int |
screeny |
1112539148 |
public static final int |
screenz |
1112539149 |
public static final int |
script |
135271429 |
public static final int |
scriptCommand |
4096 |
public static final int |
scriptqueue |
603979904 |
public static final int |
scriptreportinglevel |
553648168 |
public static final int |
search |
135267335 |
public static final int |
select |
135280132 |
public static final int |
selectallmodels |
603979906 |
public static final int |
selected |
1114638363 |
public static final int |
selectedfloat |
224 |
public static final int |
selecthetero |
603979908 |
public static final int |
selecthydrogen |
603979910 |
public static final int |
selection |
1073742140 |
public static final int |
selectionhalos |
1611141171 |
public static final int |
semicolon |
1048591 |
public static final int |
seqcode |
5 |
public static final int |
seqid |
1095761940 |
public static final int |
sequence |
1087373320 |
public static final int |
set |
1085443 |
public static final int |
setparam |
536870912 |
public static final int |
settable |
2048 |
public static final int |
shape |
1087373323 |
public static final int |
shapeCommand |
135168 |
public static final int |
shapely |
1073742144 |
public static final int |
sheet |
3145760 |
public static final int |
sheetsmoothing |
570425392 |
public static final int |
show |
135270926 |
public static final int |
showaxes |
603979914 |
public static final int |
showboundbox |
603979916 |
public static final int |
showfrank |
603979918 |
public static final int |
showhiddenselectionhalos |
603979920 |
public static final int |
showhydrogens |
603979922 |
public static final int |
showkeystrokes |
603979924 |
public static final int |
showmeasurements |
603979926 |
public static final int |
showmodvecs |
603979927 |
public static final int |
showmultiplebonds |
603979928 |
public static final int |
shownavigationpointalways |
603979930 |
public static final int |
showscript |
536870922 |
public static final int |
showtiming |
603979934 |
public static final int |
showunitcell |
603979936 |
public static final int |
showunitcelldetails |
603979937 |
public static final int |
sidechain |
3145754 |
public static final int |
sigma |
1073742146 |
public static final int |
sign |
1073742147 |
public static final int |
silent |
1073742148 |
public static final int |
sin |
135266820 |
public static final int |
site |
1095761941 |
public static final int |
size |
1141899270 |
public static final int |
slab |
554176565 |
public static final int |
slabbyatom |
603979939 |
public static final int |
slabbymolecule |
603979940 |
public static final int |
slabenabled |
603979942 |
public static final int |
slabrange |
570425393 |
public static final int |
smallmoleculemaxatoms |
553648170 |
public static final int |
smartaromatic |
603979944 |
public static final int |
smiles |
135267336 |
public static final int |
smiles2dimageformat |
545259584 |
public static final int |
smilesurlformat |
545259582 |
public static final int |
solid |
1073742150 |
public static final int |
solvent |
1613758488 |
public static final int |
solventprobe |
603979948 |
public static final int |
solventproberadius |
570425394 |
public static final int |
sort |
1276117011 |
public static final int |
spacebeforesquare |
1073742195 |
public static final int |
spacefill |
1113200651 |
public static final int |
spacegroup |
1073742152 |
public static final int |
spec_alternate |
1048607 |
public static final int |
spec_atom |
1048608 |
public static final int |
spec_chain |
1048609 |
public static final int |
spec_model |
1048610 |
public static final int |
spec_model2 |
1048611 |
public static final int |
spec_name_pattern |
1048612 |
public static final int |
spec_resid |
1048613 |
public static final int |
spec_seqcode |
1048614 |
public static final int |
spec_seqcode_range |
1048615 |
public static final int |
specialposition |
3145772 |
public static final int |
specular |
536870924 |
public static final int |
specularexponent |
553648172 |
public static final int |
specularpercent |
553648174 |
public static final int |
specularpower |
553648176 |
public static final int |
sphere |
1073742154 |
public static final int |
spin |
1611141175 |
public static final int |
spine |
3145762 |
public static final int |
spinfps |
570425396 |
public static final int |
spinx |
570425398 |
public static final int |
spiny |
570425400 |
public static final int |
spinz |
570425402 |
public static final int |
split |
1276118021 |
public static final int |
sqrt |
135266822 |
public static final int |
squared |
1073742156 |
public static final int |
ssbond |
1611141176 |
public static final int |
ssbondsbackbone |
603979952 |
public static final int |
star |
1113200652 |
public static final int |
starwidth |
570425403 |
public static final int |
state |
1073742158 |
public static final int |
statusreporting |
603979954 |
public static final int |
stddev |
192 |
public static final int |
stdinchi |
1073742159 |
public static final int |
stdinchikey |
1073742160 |
public static final int |
step |
266298 |
public static final int |
stereo |
528443 |
public static final int |
stereodegrees |
570425404 |
public static final int |
stop |
1073742162 |
public static final int |
straightness |
1112539150 |
public static final int |
strandcount |
553648178 |
public static final int |
strandcountformeshribbon |
553648180 |
public static final int |
strandcountforstrands |
553648182 |
public static final int |
strands |
1650071565 |
public static final int |
string |
4 |
public static final int |
strparam |
545259520 |
public static final int |
strproperty |
1087373312 |
public static final int |
strucid |
1087373324 |
public static final int |
strucno |
1095761942 |
public static final int |
structure |
1641025539 |
public static final int |
strutdefaultradius |
570425406 |
public static final int |
strutlengthmaximum |
570425408 |
public static final int |
struts |
1708058 |
public static final int |
strutsmultiple |
603979955 |
public static final int |
strutspacing |
553648184 |
public static final int |
sub |
1276117511 |
public static final int |
subset |
3158024 |
public static final int |
substructure |
1238369286 |
public static final int |
subsystem |
1095761943 |
public static final int |
sum |
128 |
public static final int |
sum2 |
160 |
public static final int |
supercell |
1073742163 |
public static final int |
surface |
3145756 |
public static final int |
surfacedistance |
1112539151 |
public static final int |
switchcmd |
102410 |
public static final int |
symbol |
1087375373 |
public static final int |
symmetry |
1089470478 |
public static final int |
symop |
1297090050 |
public static final int |
sync |
4156 |
public static final int |
syncmouse |
603979956 |
public static final int |
syncscript |
603979958 |
public static final int |
temperature |
1112541196 |
public static final int |
tensor |
1276117016 |
public static final int |
testflag1 |
603979960 |
public static final int |
testflag2 |
603979962 |
public static final int |
testflag3 |
603979964 |
public static final int |
testflag4 |
603979965 |
public static final int |
theta |
1112539152 |
public static final int |
thismodel |
3145758 |
public static final int |
throwcmd |
36870 |
public static final int |
ticks |
1073742164 |
public static final int |
timeout |
536875070 |
public static final int |
times |
269484209 |
public static final int |
timestimes |
269484227 |
public static final int |
title |
1073742166 |
public static final int |
titleformat |
1073742168 |
public static final int |
to |
1074790746 |
public static final int |
togglelabel |
1610612741 |
public static final int |
top |
1074790748 |
public static final int |
torsion |
1073742174 |
public static final int |
trace |
1113200654 |
public static final int |
tracealpha |
603979966 |
public static final int |
trajectory |
536870926 |
public static final int |
transform |
1073742176 |
public static final int |
translate |
4160 |
public static final int |
translateSelected |
4162 |
public static final int |
translation |
1073742178 |
public static final int |
translucent |
603979967 |
public static final int |
triangles |
1073742182 |
public static final int |
trim |
1276117512 |
public static final int |
trycmd |
364558 |
public static final int |
twistedsheets |
603979968 |
public static final int |
type |
1141899272 |
public static final int |
unaryMinus |
269484224 |
public static final int |
unbind |
4164 |
public static final int |
undo |
536870928 |
public static final int |
undomove |
4165 |
public static final int |
unitcell |
1614417948 |
public static final int |
unitcellcolor |
545259586 |
public static final int |
unitx |
1112539153 |
public static final int |
unitxyz |
1146093582 |
public static final int |
unity |
1112539154 |
public static final int |
unitz |
1112539155 |
public static final int |
url |
1074790760 |
public static final int |
useminimizationthread |
603979970 |
public static final int |
usenumberlocalization |
603979971 |
public static final int |
user |
1073742186 |
public static final int |
usercolorscheme |
536870930 |
public static final int |
val |
1073742188 |
public static final int |
valence |
1095763991 |
public static final int |
validation |
1073742189 |
public static final int |
vanderwaals |
1649412120 |
public static final int |
var |
36868 |
public static final int |
variable |
1073742190 |
public static final int |
variables |
1073742192 |
public static final int |
varray |
7 |
public static final int |
vector |
135198 |
public static final int |
vectorscale |
1649410049 |
public static final int |
vectorscentered |
603979972 |
public static final int |
vectorsymmetry |
603979973 |
public static final int |
vertices |
1073742194 |
public static final int |
vibration |
4166 |
public static final int |
vibrationperiod |
570425412 |
public static final int |
vibrationscale |
570425414 |
public static final int |
vibx |
1112541202 |
public static final int |
vibxyz |
1146095631 |
public static final int |
viby |
1112541203 |
public static final int |
vibz |
1112541204 |
public static final int |
visible |
3145774 |
public static final int |
visualrange |
570425416 |
public static final int |
volume |
1313866249 |
public static final int |
w |
1141899281 |
public static final int |
waitformoveto |
603979974 |
public static final int |
whilecmd |
102406 |
public static final int |
width |
1073742196 |
public static final int |
windowcentered |
603979975 |
public static final int |
wireframe |
659488 |
public static final int |
wireframerotation |
603979976 |
public static final int |
within |
135266325 |
public static final int |
write |
135270422 |
public static final int |
x |
1112541205 |
public static final int |
xyz |
1146095626 |
public static final int |
y |
1112541206 |
public static final int |
z |
1112541207 |
public static final int |
zap |
1060873 |
public static final int |
zdepth |
553648186 |
public static final int |
zerobasedxyzrasmol |
603979978 |
public static final int |
zoom |
4168 |
public static final int |
zoomenabled |
603979980 |
public static final int |
zoomheight |
603979982 |
public static final int |
zoomlarge |
603979983 |
public static final int |
zoomTo |
4170 |
public static final int |
zshade |
603979984 |
public static final int |
zshadepower |
553648190 |
public static final int |
zslab |
553648188 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
ERROR_invalidArgument |
22 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
MIN_AXIS_LEN |
1.5f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final short |
COLOR |
10 |
private static final java.lang.String |
FONTFACE |
"Serif" |
private static final int |
FONTSIZE |
20 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final java.lang.String |
defaultFontName |
"SansSerif" |
static final int |
defaultFontSize |
16 |
static final java.lang.String |
defaultFontStyle |
"Plain" |
public static final int |
frankMargin |
4 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
FONTFACE |
"SansSerif" |
private static final int |
FONTSIZE |
12 |
private static final java.lang.String |
FONTSTYLE |
"Plain" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final java.lang.String |
PREVIOUS_MESH_ID |
"+PREVIOUS_MESH+" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final java.lang.String |
PREVIOUS_MESH_ID |
"+PREVIOUS_MESH+" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final float |
RADIUS_MAX |
4.0f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MAX_BOND_CLICK_DISTANCE_SQUARED |
100 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
eightPiSquared100 |
7895.6835208714865 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
PUTTY_AbsoluteLinear |
7 |
private static final int |
PUTTY_AbsoluteNonlinear |
3 |
private static final int |
PUTTY_ImpliedRMS |
8 |
private static final int |
PUTTY_NormalizedLinear |
4 |
private static final int |
PUTTY_NormalizedNonlinear |
0 |
private static final int |
PUTTY_RelativeLinear |
5 |
private static final int |
PUTTY_RelativeNonlinear |
1 |
private static final int |
PUTTY_ScaledLinear |
6 |
private static final int |
PUTTY_ScaledNonlinear |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
KEY_LIST |
"BEGIN:2 END:3 STOP:0 POINT:0 POINTS:0 LINES:1 LINE_LOOP:2 LINE_STRIP:3 TRIANGLES:4 TRIANGLE_STRIP:5 TRIANGLE_FAN:6 LINE:1 VERTEX:4 NORMAL:5 COLOR:6 LINEWIDTH:10 SAUSAGE:14 DIAMETER:-100" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
ALPHA |
25 |
public static final int |
ALPHA_TRIANGLE |
17 |
public static final int |
BEGIN |
2 |
public static final int |
CHAR |
23 |
public static final int |
COLOR |
6 |
public static final int |
CONE |
27 |
public static final int |
CUSTOM_CYLINDER |
15 |
public static final int |
CYLINDER |
9 |
public static final int |
DISABLE |
13 |
public static final int |
DOTWIDTH |
16 |
public static final int |
ELLIPSOID |
18 |
public static final int |
ENABLE |
12 |
public static final int |
END |
3 |
public static final int |
FONT |
19 |
public static final int |
FONT_AXES |
22 |
public static final int |
FONT_SCALE |
20 |
public static final int |
FONT_VERTEX |
21 |
public static final int |
GL_LINE_LOOP |
2 |
public static final int |
GL_LINE_STRIP |
3 |
public static final int |
GL_LINES |
1 |
public static final int |
GL_POINTS |
0 |
public static final int |
GL_TRIANGLE_FAN |
6 |
public static final int |
GL_TRIANGLE_STRIP |
5 |
public static final int |
GL_TRIANGLES |
4 |
public static final int |
INDENT |
24 |
public static final int |
JMOL_DIAMETER |
-100 |
public static final int |
LINEWIDTH |
10 |
public static final int |
NORMAL |
5 |
public static final int |
PICK_COLOR |
29 |
public static final int |
QUADRIC |
26 |
public static final int |
RESET_NORMAL |
28 |
public static final int |
SAUSAGE |
14 |
public static final int |
SIMPLE_LINE |
1 |
public static final int |
SPHERE |
7 |
public static final int |
STOP |
0 |
public static final int |
TRICOLOR_TRIANGLE |
8 |
public static final int |
VERTEX |
4 |
public static final int |
WIDTHSCALE |
11 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final short |
DIPOLE_TYPE_ATOMS |
2 |
static final short |
DIPOLE_TYPE_BOND |
3 |
static final short |
DIPOLE_TYPE_MOLECULAR |
4 |
static final short |
DIPOLE_TYPE_POINTS |
1 |
static final short |
DIPOLE_TYPE_POINTVECTOR |
5 |
static final short |
DIPOLE_TYPE_UNKNOWN |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final short |
DEFAULT_MAD |
5 |
static final float |
DEFAULT_OFFSETSIDE |
0.4000000059604645f |
private static final float |
E_ANG_PER_DEBYE |
0.20819400250911713f |
Modifier and Type | Constant Field | Value |
---|---|---|
static final float |
SURFACE_DISTANCE_FOR_CALCULATION |
10.0f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MAX_OBJECT_CLICK_DISTANCE_SQUARED |
100 |
private static final int |
PT_BITSET |
3 |
private static final int |
PT_COORD |
1 |
private static final int |
PT_IDENTIFIER |
2 |
private static final int |
PT_MODEL_BASED_POINTS |
5 |
private static final int |
PT_MODEL_INDEX |
4 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
PROPERTY_MODES |
"ax ce co de eq mo on op sc tr" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
DEFAULT_DISTANCE_FACTOR |
1.850000023841858f |
private static final float |
DEFAULT_FACECENTEROFFSET |
0.25f |
public static final int |
EDGES_ALL |
1 |
public static final int |
EDGES_FRONT |
2 |
private static final int |
EDGES_NONE |
0 |
private static final int |
FACE_COUNT_MAX |
147 |
private static final int |
MAX_VERTICES |
150 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MAX_OBJECT_CLICK_DISTANCE_SQUARED |
100 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
STEREOCHEMISTRY_ALLENE |
2 |
static final int |
STEREOCHEMISTRY_DEFAULT |
0 |
static final int |
STEREOCHEMISTRY_OCTAHEDRAL |
6 |
static final int |
STEREOCHEMISTRY_SQUARE_PLANAR |
8 |
static final int |
STEREOCHEMISTRY_TETRAHEDRAL |
4 |
static final int |
STEREOCHEMISTRY_TRIGONAL_BIPYRAMIDAL |
5 |
static final java.lang.String |
UNBRACKETED_SET |
"B, C, N, O, P, S, F, Cl, Br, I," |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
TYPE_ANY |
81 |
public static final int |
TYPE_AROMATIC |
17 |
public static final int |
TYPE_ATROPISOMER_1 |
769 |
public static final int |
TYPE_ATROPISOMER_2 |
1025 |
public static final int |
TYPE_BIO_PAIR |
112 |
public static final int |
TYPE_BIO_SEQUENCE |
96 |
public static final int |
TYPE_DIRECTIONAL_1 |
257 |
public static final int |
TYPE_DIRECTIONAL_2 |
513 |
public static final int |
TYPE_DOUBLE |
2 |
public static final int |
TYPE_MULTIPLE |
999 |
public static final int |
TYPE_NONE |
0 |
public static final int |
TYPE_RING |
65 |
public static final int |
TYPE_SINGLE |
1 |
public static final int |
TYPE_TRIPLE |
3 |
public static final int |
TYPE_UNKNOWN |
-1 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MODE_ARRAY |
2 |
private static final int |
MODE_BITSET |
1 |
private static final int |
MODE_MAP |
3 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
radiansPerDegree |
0.01745329238474369f |
static final java.lang.String |
TYPES |
"__dat" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
INITIAL_ATOMS |
16 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
ATOM_COUNT_MAX |
100 |
private static final int |
c2 |
16 |
private static final int |
c3 |
17 |
private static final int |
c4 |
18 |
private static final int |
c5 |
19 |
private static final int |
c6 |
20 |
private static final int |
c8 |
22 |
private static final int |
firstProper |
14 |
static final int |
OPERATION_IMPROPER_AXIS |
2 |
static final int |
OPERATION_INVERSION_CENTER |
3 |
static final int |
OPERATION_PLANE |
0 |
static final int |
OPERATION_PROPER_AXIS |
1 |
private static final int |
s10 |
10 |
private static final int |
s12 |
12 |
private static final int |
s3 |
3 |
private static final int |
s4 |
4 |
private static final int |
s5 |
5 |
private static final int |
s6 |
6 |
private static final int |
s8 |
8 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
NAME_HALL |
5 |
private static final int |
NAME_HM |
3 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
twoP2 |
19.739208802178716 |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final int |
CHECK1 |
1 |
protected static final int |
CHECK2 |
2 |
protected static final int |
CHECK3 |
3 |
protected static final int |
FINISH |
-2 |
protected static final int |
INIT |
-1 |
protected static final int |
MAIN |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
ALPHA_SHIFT |
13 |
public static final short |
BLACK |
4 |
public static final short |
BLUE |
7 |
public static final short |
CHANGEABLE_MASK |
-32768 |
public static final short |
CYAN |
9 |
public static final short |
GOLD |
23 |
public static final short |
GRAY |
12 |
public static final short |
GREEN |
11 |
public static final short |
HOTPINK |
22 |
public static final short |
INHERIT_ALL |
0 |
public static final short |
INHERIT_COLOR |
1 |
public static final int |
LAST_AVAILABLE_COLIX |
2047 |
public static final short |
LIME |
14 |
public static final short |
MAGENTA |
20 |
public static final short |
MAROON |
15 |
public static final short |
NAVY |
16 |
public static final short |
OLIVE |
17 |
public static final short |
OPAQUE_MASK |
-30721 |
public static final short |
ORANGE |
5 |
public static final short |
PINK |
6 |
public static final short |
PURPLE |
18 |
public static final short |
RAW_RGB |
3 |
private static final int |
RAW_RGB_INT |
3 |
public static final short |
RED |
10 |
public static final short |
SILVER |
13 |
public static final short |
SPECIAL_COLIX_MAX |
4 |
public static final short |
TEAL |
19 |
public static final int |
TRANSLUCENT_MASK |
30720 |
public static final int |
TRANSLUCENT_SCREENED |
30720 |
public static final int |
TRANSLUCENT_SHIFT |
11 |
public static final int |
TRANSPARENT |
16384 |
public static final short |
UNMASK_CHANGEABLE_TRANSLUCENT |
2047 |
public static final short |
USE_PALETTE |
2 |
public static final short |
WHITE |
8 |
public static final short |
YELLOW |
21 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
ALT |
16 |
public static final int |
AMINO |
5 |
public static final int |
BGYOR |
1 |
public static final int |
BW |
10 |
public static final int |
BWR |
7 |
private static final java.lang.String |
BYELEMENT_JMOL |
"byelement_jmol" |
public static final java.lang.String |
BYELEMENT_PREFIX |
"byelement" |
private static final java.lang.String |
BYELEMENT_RASMOL |
"byelement_rasmol" |
private static final java.lang.String |
BYRESIDUE_AMINO |
"byresidue_amino" |
public static final java.lang.String |
BYRESIDUE_PREFIX |
"byresidue" |
private static final java.lang.String |
BYRESIDUE_SHAPELY |
"byresidue_shapely" |
public static final int |
CUSTOM |
-1 |
public static final int |
FRIENDLY |
12 |
private static final int |
GRAY |
-8355712 |
public static final int |
HIGH |
9 |
public static final int |
INHERIT |
15 |
public static final int |
JMOL |
2 |
public static final int |
LOW |
8 |
public static final int |
RASMOL |
3 |
public static final int |
RESU |
-14 |
public static final int |
ROYGB |
0 |
public static final int |
RWB |
6 |
public static final int |
SHAPELY |
4 |
public static final int |
USER |
-13 |
public static final int |
WB |
11 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
DEFAULT_MAX_SIZE |
100 |
public static final java.lang.String |
ERROR_FLAG |
"#??" |
public static final java.lang.String |
NOHISTORYATALL_FLAG |
"#----" |
public static final java.lang.String |
NOHISTORYLINE_FLAG |
"#--" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
BOND_AROMATIC |
515 |
public static final int |
BOND_AROMATIC_DOUBLE |
514 |
public static final int |
BOND_AROMATIC_MASK |
512 |
public static final int |
BOND_AROMATIC_SINGLE |
513 |
public static final int |
BOND_COVALENT_DOUBLE |
2 |
public static final int |
BOND_COVALENT_MASK |
1023 |
public static final int |
BOND_COVALENT_QUADRUPLE |
4 |
public static final int |
BOND_COVALENT_SINGLE |
1 |
public static final int |
BOND_COVALENT_TRIPLE |
3 |
public static final int |
BOND_H_CALC |
4096 |
public static final int |
BOND_H_CALC_MASK |
28672 |
public static final int |
BOND_H_MINUS_3 |
14336 |
public static final int |
BOND_H_MINUS_4 |
16384 |
public static final int |
BOND_H_NUCLEOTIDE |
18432 |
public static final int |
BOND_H_PLUS_2 |
6144 |
public static final int |
BOND_H_PLUS_3 |
8192 |
public static final int |
BOND_H_PLUS_4 |
10240 |
public static final int |
BOND_H_PLUS_5 |
12288 |
public static final int |
BOND_H_REGULAR |
2048 |
public static final int |
BOND_HBOND_SHIFT |
11 |
public static final int |
BOND_HYDROGEN_MASK |
30720 |
public static final int |
BOND_NEW |
131072 |
public static final int |
BOND_ORDER_ANY |
65535 |
public static final int |
BOND_ORDER_NULL |
131071 |
public static final int |
BOND_ORDER_UNSPECIFIED |
17 |
public static final int |
BOND_PARTIAL_MASK |
224 |
public static final int |
BOND_PARTIAL01 |
33 |
public static final int |
BOND_PARTIAL12 |
66 |
public static final int |
BOND_PARTIAL23 |
97 |
public static final int |
BOND_PARTIAL32 |
100 |
public static final int |
BOND_PYMOL_MULT |
98304 |
public static final int |
BOND_PYMOL_SINGLE |
65536 |
public static final int |
BOND_STEREO_FAR |
1041 |
public static final int |
BOND_STEREO_MASK |
1024 |
public static final int |
BOND_STEREO_NEAR |
1025 |
public static final int |
BOND_STRUT |
32768 |
public static final int |
BOND_SULFUR_MASK |
256 |
public static final int |
FLAG_AROMATIC_DEFINED |
8 |
public static final int |
FLAG_AROMATIC_DOUBLE |
16 |
public static final int |
FLAG_AROMATIC_STRICT |
4 |
public static final int |
FLAG_IGNORE_STEREOCHEMISTRY |
2 |
public static final int |
FLAG_NO_AROMATIC |
1 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
firstIsotope |
4 |
public static final int |
FORMAL_CHARGE_MAX |
7 |
public static final int |
FORMAL_CHARGE_MIN |
-4 |
private static final java.lang.String |
naturalIsotopes |
"1H,12C,14N," |
public static final int |
RAD_COV_BODR_2014_02_22 |
1 |
public static final int |
RAD_COV_IONIC_OB1_100_1 |
0 |
public static final java.lang.String |
VdwPROBE |
"#VDW radii for PROBE;{_H}.vdw = 1.0;{_H and connected(_C) and not connected(within(smiles,\'[a]\'))}.vdw = 1.17;{_C}.vdw = 1.75;{_C and connected(3) and connected(_O)}.vdw = 1.65;{_N}.vdw = 1.55;{_O}.vdw = 1.4;{_P}.vdw = 1.8;{_S}.vdw = 1.8;message VDW radii for H, C, N, O, P, and S set according to Word, et al., J. Mol. Biol. (1999) 285, 1711-1733" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final byte |
ENDCAPS_FLAT |
2 |
public static final byte |
ENDCAPS_NONE |
0 |
public static final byte |
ENDCAPS_OPEN |
1 |
public static final byte |
ENDCAPS_OPENEND |
4 |
public static final byte |
ENDCAPS_SPHERICAL |
3 |
public static final int |
EXPORT_CARTESIAN |
1 |
public static final int |
EXPORT_NOT |
0 |
public static final int |
EXPORT_RAYTRACER |
2 |
public static final int |
xGT |
4 |
public static final int |
xLT |
8 |
public static final int |
yGT |
1 |
public static final int |
yLT |
2 |
public static final int |
zGT |
16 |
public static final int |
zLT |
32 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
SCRIPT_CHECK |
0 |
private static final int |
SCRIPT_NOWAIT |
2 |
private static final int |
SCRIPT_WAIT |
1 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
maxLevel |
3 |
private static final float |
oneFifth |
1.2566370964050293f |
private static final float |
oneTenth |
0.6283185482025146f |
public static final int |
standardLevel |
3 |
private static final boolean |
VALIDATE |
true |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
LEVEL_DEBUG |
5 |
public static final int |
LEVEL_DEBUGHIGH |
6 |
public static final int |
LEVEL_ERROR |
2 |
public static final int |
LEVEL_FATAL |
1 |
public static final int |
LEVEL_INFO |
4 |
public static final int |
LEVEL_MAX |
7 |
public static final int |
LEVEL_WARN |
3 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
ASCENDER |
1 |
private static final int |
DESCENDER |
0 |
private static final int |
LAST |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
P_CHECK |
3 |
public static final int |
P_CONTOUR |
4 |
public static final int |
P_EXPLICIT_COLOR |
4 |
protected static final int |
SEED_COUNT |
25 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final double |
TWOPI |
6.283185307179586 |
public static final char |
TYPE_DISP_FOURIER |
102 |
public static final char |
TYPE_DISP_LEGENDRE |
108 |
public static final char |
TYPE_DISP_SAWTOOTH |
115 |
public static final char |
TYPE_OCC_CRENEL |
99 |
public static final char |
TYPE_OCC_FOURIER |
111 |
public static final char |
TYPE_SPIN_FOURIER |
109 |
public static final char |
TYPE_SPIN_SAWTOOTH |
116 |
public static final char |
TYPE_U_FOURIER |
117 |
public static final char |
TYPE_U_LEGENDRE |
76 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
NORMIX_GEODESIC_LEVEL |
3 |
public static final short |
NORMIX_NULL |
9999 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
maxSphereCache |
128 |
private static final int |
SDIM |
40 |
public static final int |
SHADE_INDEX_LAST |
63 |
private static final int |
SHADE_INDEX_MAX |
64 |
public static final byte |
SHADE_INDEX_NOISY_LIMIT |
56 |
public static final byte |
SHADE_INDEX_NORMAL |
52 |
private static final int |
SLIM |
20 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
INFO_A |
0 |
public static final int |
INFO_ALPHA |
3 |
public static final int |
INFO_B |
1 |
public static final int |
INFO_BETA |
4 |
public static final int |
INFO_C |
2 |
public static final int |
INFO_DIMENSIONS |
6 |
public static final int |
INFO_GAMMA |
5 |
protected static final float |
toRadians |
0.01745329238474369f |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
freeEnumSize |
2 |
private static final int |
freePointsSize |
6 |
private static final int |
freeScreensSize |
6 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
infoList |
";.............;eigenvalues..;eigenvectors.;asymmatrix...;symmatrix....;value........;isotropy.....;anisotropy...;asymmetry....;eulerzyz.....;eulerzxz.....;quaternion...;indices......;string.......;type.........;id...........;span.........;skew........." |
private static final float |
INTERACTION_FACTOR |
0.03999999910593033f |
private static final java.lang.String |
KNOWN_TYPES |
";iso........;adp........;tls-u......;tls-r......;ms.........;efg........;isc........;charge.....;quadrupole." |
private static final float |
MAGNETIC_SUSCEPTIBILITY_FACTOR |
0.009999999776482582f |
public static final int |
TYPE_ADP |
1 |
public static final int |
TYPE_CHARGE |
7 |
public static final int |
TYPE_EFG |
5 |
public static final int |
TYPE_ISC |
6 |
public static final int |
TYPE_ISO |
0 |
public static final int |
TYPE_MS |
4 |
public static final int |
TYPE_OTHER |
-1 |
public static final int |
TYPE_QUADRUPOLE |
8 |
public static final int |
TYPE_TLS_R |
3 |
public static final int |
TYPE_TLS_U |
2 |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final double |
twoPI |
6.283185307179586 |
public static final int |
TYPE_SPIN |
-2 |
public static final int |
TYPE_VIBRATION |
-1 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
ACTION_assignNew |
0 |
public static final int |
ACTION_center |
1 |
public static final int |
ACTION_clickFrank |
2 |
public static final int |
ACTION_connectAtoms |
3 |
public static final int |
ACTION_count |
47 |
public static final int |
ACTION_deleteAtom |
4 |
public static final int |
ACTION_deleteBond |
5 |
public static final int |
ACTION_depth |
6 |
public static final int |
ACTION_dragAtom |
7 |
public static final int |
ACTION_dragDrawObject |
8 |
public static final int |
ACTION_dragDrawPoint |
9 |
public static final int |
ACTION_dragLabel |
10 |
public static final int |
ACTION_dragMinimize |
11 |
public static final int |
ACTION_dragMinimizeMolecule |
12 |
public static final int |
ACTION_dragSelected |
13 |
public static final int |
ACTION_dragZ |
14 |
public static final int |
ACTION_multiTouchSimulation |
15 |
public static final int |
ACTION_navTranslate |
16 |
public static final int |
ACTION_pickAtom |
17 |
public static final int |
ACTION_pickIsosurface |
18 |
public static final int |
ACTION_pickLabel |
19 |
public static final int |
ACTION_pickMeasure |
20 |
public static final int |
ACTION_pickNavigate |
21 |
public static final int |
ACTION_pickPoint |
22 |
public static final int |
ACTION_popupMenu |
23 |
public static final int |
ACTION_reset |
24 |
public static final int |
ACTION_rotate |
25 |
public static final int |
ACTION_rotateBranch |
26 |
public static final int |
ACTION_rotateSelected |
27 |
public static final int |
ACTION_rotateZ |
28 |
public static final int |
ACTION_rotateZorZoom |
29 |
public static final int |
ACTION_select |
30 |
public static final int |
ACTION_selectAndDrag |
31 |
public static final int |
ACTION_selectAndNot |
32 |
public static final int |
ACTION_selectNone |
33 |
public static final int |
ACTION_selectOr |
34 |
public static final int |
ACTION_selectToggle |
35 |
public static final int |
ACTION_selectToggleExtended |
36 |
public static final int |
ACTION_setMeasure |
37 |
public static final int |
ACTION_slab |
38 |
public static final int |
ACTION_slabAndDepth |
39 |
public static final int |
ACTION_slideZoom |
40 |
public static final int |
ACTION_spinDrawObjectCCW |
41 |
public static final int |
ACTION_spinDrawObjectCW |
42 |
public static final int |
ACTION_stopMotion |
43 |
public static final int |
ACTION_swipe |
44 |
public static final int |
ACTION_translate |
45 |
public static final int |
ACTION_wheelZoom |
46 |
public static final float |
DEFAULT_GESTURE_SWIPE_FACTOR |
1.0f |
public static final float |
DEFAULT_MOUSE_DRAG_FACTOR |
1.0f |
public static final float |
DEFAULT_MOUSE_WHEEL_FACTOR |
1.149999976158142f |
private static final long |
MAX_DOUBLE_CLICK_MILLIS |
700L |
protected static final long |
MININUM_GESTURE_DELAY_MILLISECONDS |
10L |
public static final int |
PICKING_ASSIGN_ATOM |
32 |
public static final int |
PICKING_ASSIGN_BOND |
33 |
public static final int |
PICKING_CENTER |
3 |
public static final int |
PICKING_CONNECT |
24 |
public static final int |
PICKING_DELETE_ATOM |
7 |
public static final int |
PICKING_DELETE_BOND |
8 |
public static final int |
PICKING_DRAG_ATOM |
28 |
public static final int |
PICKING_DRAG_LIGAND |
36 |
public static final int |
PICKING_DRAG_MINIMIZE |
29 |
public static final int |
PICKING_DRAG_MINIMIZE_MOLECULE |
30 |
public static final int |
PICKING_DRAG_MOLECULE |
27 |
public static final int |
PICKING_DRAG_SELECTED |
26 |
public static final int |
PICKING_DRAW |
4 |
public static final int |
PICKING_IDENTIFY |
1 |
public static final int |
PICKING_IDENTIFY_BOND |
35 |
public static final int |
PICKING_INVERT_STEREO |
31 |
public static final int |
PICKING_LABEL |
2 |
public static final int |
PICKING_MEASURE |
18 |
public static final int |
PICKING_MEASURE_ANGLE |
20 |
public static final int |
PICKING_MEASURE_DISTANCE |
19 |
public static final int |
PICKING_MEASURE_SEQUENCE |
22 |
public static final int |
PICKING_MEASURE_TORSION |
21 |
public static final int |
PICKING_NAVIGATE |
23 |
public static final int |
PICKING_OFF |
0 |
public static final int |
PICKING_ROTATE_BOND |
34 |
public static final int |
PICKING_SELECT_ATOM |
9 |
public static final int |
PICKING_SELECT_CHAIN |
11 |
public static final int |
PICKING_SELECT_ELEMENT |
17 |
public static final int |
PICKING_SELECT_GROUP |
10 |
public static final int |
PICKING_SELECT_MODEL |
16 |
public static final int |
PICKING_SELECT_MOLECULE |
12 |
public static final int |
PICKING_SELECT_POLYMER |
13 |
public static final int |
PICKING_SELECT_SITE |
15 |
public static final int |
PICKING_SELECT_STRUCTURE |
14 |
public static final int |
PICKING_SPIN |
5 |
public static final int |
PICKING_STRUTS |
25 |
public static final int |
PICKING_SYMMETRY |
6 |
public static final int |
PICKINGSTYLE_MEASURE_OFF |
5 |
public static final int |
PICKINGSTYLE_MEASURE_ON |
4 |
public static final int |
PICKINGSTYLE_SELECT_CHIME |
0 |
public static final int |
PICKINGSTYLE_SELECT_DRAG |
3 |
public static final int |
PICKINGSTYLE_SELECT_JMOL |
0 |
public static final int |
PICKINGSTYLE_SELECT_PFAAT |
2 |
public static final int |
PICKINGSTYLE_SELECT_RASMOL |
1 |
private static final int |
SLIDE_ZOOM_X_PERCENT |
98 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
FRAME_FIRST |
-1 |
static final int |
FRAME_LAST |
1 |
static final int |
MODEL_CURRENT |
0 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
DATA_SAVE_IN_STATE |
4 |
private static final int |
DATA_SELECTION_MAP |
2 |
private static final int |
DATA_TYPE |
3 |
private static final int |
DATA_VALUE |
1 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final java.lang.String |
ADD_HYDROGEN_TITLE |
"Viewer.AddHydrogens" |
public static final int |
ALIGN_CENTER |
2 |
public static final int |
ALIGN_LEFT |
1 |
public static final int |
ALIGN_NONE |
0 |
public static final int |
ALIGN_RIGHT |
3 |
public static final java.lang.String |
allowedQuaternionFrames |
"RC;RP;a;b;c;n;p;q;x;" |
public static final int |
ALPHA_CARBON_VISIBILITY_FLAG |
1040384 |
public static final float |
ANGSTROMS_PER_BOHR |
0.529177188873291f |
public static final int |
argbsIsosurfaceNegative |
-6283184 |
public static final int |
argbsIsosurfacePositive |
-11525984 |
public static final int |
ATOM_INFRAME |
1 |
public static final int |
ATOM_INFRAME_NOTHIDDEN |
9 |
public static final int |
ATOM_NOFLAGS |
-64 |
public static final int |
ATOM_NOTHIDDEN |
8 |
public static final int |
ATOM_SHAPE_VIS_MASK |
-10 |
public static final int |
ATOM_VISIBLE |
4 |
public static final int |
ATOM_VISSET |
2 |
public static final byte |
ATOMID_ALPHA_CARBON |
2 |
public static final int |
ATOMID_ALPHA_ONLY_MASK |
4 |
public static final byte |
ATOMID_AMINO_NITROGEN |
1 |
public static final byte |
ATOMID_C1_PRIME |
12 |
public static final byte |
ATOMID_C2 |
33 |
public static final byte |
ATOMID_C2_PRIME |
11 |
public static final byte |
ATOMID_C3_PRIME |
9 |
public static final byte |
ATOMID_C4 |
35 |
public static final byte |
ATOMID_C4_PRIME |
8 |
public static final byte |
ATOMID_C5 |
36 |
public static final byte |
ATOMID_C5_PRIME |
7 |
public static final byte |
ATOMID_C5M |
45 |
public static final byte |
ATOMID_C6 |
37 |
public static final byte |
ATOMID_C7 |
49 |
public static final byte |
ATOMID_C8 |
40 |
public static final byte |
ATOMID_CARBONYL_CARBON |
3 |
public static final byte |
ATOMID_CARBONYL_OD1 |
14 |
public static final byte |
ATOMID_CARBONYL_OD2 |
15 |
public static final byte |
ATOMID_CARBONYL_OE1 |
16 |
public static final byte |
ATOMID_CARBONYL_OE2 |
17 |
public static final byte |
ATOMID_CARBONYL_OXYGEN |
4 |
public static final int |
ATOMID_DISTINGUISHING_ATOM_MAX |
14 |
public static final byte |
ATOMID_H3T_TERMINUS |
88 |
public static final byte |
ATOMID_H5T_TERMINUS |
72 |
public static final byte |
ATOMID_HO3_PRIME |
89 |
public static final byte |
ATOMID_HO5_PRIME |
90 |
public static final byte |
ATOMID_N1 |
32 |
public static final byte |
ATOMID_N2 |
43 |
public static final byte |
ATOMID_N3 |
34 |
public static final byte |
ATOMID_N4 |
42 |
public static final byte |
ATOMID_N6 |
44 |
public static final byte |
ATOMID_N7 |
39 |
public static final byte |
ATOMID_N9 |
41 |
public static final int |
ATOMID_NUCLEIC_MASK |
8128 |
public static final byte |
ATOMID_NUCLEIC_PHOSPHORUS |
13 |
public static final byte |
ATOMID_O1 |
5 |
public static final byte |
ATOMID_O1P |
74 |
public static final byte |
ATOMID_O2 |
38 |
public static final byte |
ATOMID_O2_PRIME |
79 |
public static final byte |
ATOMID_O2P |
76 |
public static final byte |
ATOMID_O3_PRIME |
10 |
public static final byte |
ATOMID_O4 |
47 |
public static final byte |
ATOMID_O4_PRIME |
78 |
public static final byte |
ATOMID_O5_PRIME |
6 |
public static final byte |
ATOMID_O5T_TERMINUS |
73 |
public static final byte |
ATOMID_O6 |
46 |
public static final byte |
ATOMID_OP1 |
75 |
public static final byte |
ATOMID_OP2 |
77 |
public static final int |
ATOMID_PHOSPHORUS_ONLY_MASK |
8192 |
public static final int |
ATOMID_PROTEIN_MASK |
14 |
public static final byte |
ATOMID_S4 |
48 |
public static final byte |
ATOMID_TERMINATING_OXT |
64 |
public static final int |
AXES_DEFAULT_FONTSIZE |
14 |
public static final java.lang.String |
copyright |
"(C) 2012 Jmol Development" |
public static final short |
DEFAULT_BOND_MILLIANGSTROM_RADIUS |
150 |
public static final float |
DEFAULT_BOND_RADIUS |
0.15000000596046448f |
public static final float |
DEFAULT_BOND_TOLERANCE |
0.44999998807907104f |
public static final java.lang.String |
DEFAULT_FONTFACE |
"SansSerif" |
public static final java.lang.String |
DEFAULT_FONTSTYLE |
"Plain" |
public static final java.lang.String |
DEFAULT_HELP_PATH |
"http://chemapps.stolaf.edu/jmol/docs/index.htm" |
public static final float |
DEFAULT_MAX_CONNECT_DISTANCE |
1.0E8f |
public static final float |
DEFAULT_MIN_BOND_DISTANCE |
0.4000000059604645f |
public static final float |
DEFAULT_MIN_CONNECT_DISTANCE |
0.10000000149011612f |
public static final int |
DEFAULT_PERCENT_VDW_ATOM |
23 |
public static final float |
DEFAULT_STRUT_RADIUS |
0.30000001192092896f |
public static final java.lang.String |
EMBEDDED_SCRIPT_TAG |
"**** Jmol Embedded Script ****" |
public static final float |
ENC_CALC_MAX_DIST |
3.0f |
public static final int |
ENV_CALC_MAX_LEVEL |
3 |
public static final java.lang.String |
EXPORT_DRIVER_LIST |
"Idtf;Maya;Povray;Vrml;X3d;Tachyon;Obj" |
public static final int |
GROUPID_AMINO_MAX |
24 |
public static final int |
GROUPID_ARGININE |
2 |
public static final int |
GROUPID_ASPARAGINE |
3 |
public static final int |
GROUPID_ASPARTATE |
4 |
public static final int |
GROUPID_CYSTEINE |
5 |
public static final int |
GROUPID_GLUTAMATE |
7 |
public static final int |
GROUPID_GLUTAMINE |
6 |
public static final int |
GROUPID_HISTIDINE |
9 |
private static final int |
GROUPID_ION_MAX |
48 |
private static final int |
GROUPID_ION_MIN |
46 |
public static final int |
GROUPID_LYSINE |
12 |
public static final int |
GROUPID_NUCLEIC_MAX |
42 |
public static final int |
GROUPID_PROLINE |
15 |
public static final int |
GROUPID_SOLVENT_MIN |
45 |
public static final int |
GROUPID_TRYPTOPHAN |
19 |
public static final int |
GROUPID_WATER |
42 |
public static final java.lang.String |
IMAGE_OR_SCENE |
";jpg;jpeg;jpg64;jpeg64;gif;gift;pdf;ppm;png;pngj;pngt;scene;" |
public static final java.lang.String |
IMAGE_TYPES |
";jpg;jpeg;jpg64;jpeg64;gif;gift;pdf;ppm;png;pngj;pngt;" |
public static final java.lang.String |
JPEG_EXTENSIONS |
";jpg;jpeg;jpg64;jpeg64;" |
public static final int |
JSV_NOT |
-1 |
public static final int |
JSV_SELECT |
14 |
public static final int |
JSV_SEND_H1SIMULATE |
28 |
public static final int |
JSV_SEND_JDXMOL |
0 |
public static final int |
JSV_SETPEAKS |
7 |
public static final int |
JSV_STRUCTURE |
21 |
public static final int |
LABEL_ALIGN_FLAGS |
12 |
public static final int |
LABEL_DEFAULT_FONTSIZE |
13 |
public static final int |
LABEL_DEFAULT_X_OFFSET |
4 |
public static final int |
LABEL_DEFAULT_Y_OFFSET |
4 |
public static final int |
LABEL_EXACT_OFFSET_FLAG |
128 |
public static final int |
LABEL_FLAG_OFFSET |
8 |
public static final int |
LABEL_FLAGS |
255 |
public static final int |
LABEL_FRONT_FLAG |
32 |
public static final int |
LABEL_GROUP_FLAG |
16 |
public static final int |
LABEL_MAXIMUM_FONTSIZE |
63 |
public static final int |
LABEL_MINIMUM_FONTSIZE |
6 |
public static final int |
LABEL_POINTER_FLAGS |
3 |
public static final int |
LABEL_SCALE_FLAG |
64 |
public static final int |
LABEL_ZPOS_FLAGS |
48 |
public static final java.lang.String |
LOAD_ATOM_DATA_TYPES |
";xyz;vxyz;vibration;temperature;occupancy;partialcharge;" |
public static final short |
madMultipleBondSmallMaximum |
500 |
public static final int |
MAXIMUM_AUTO_BOND_COUNT |
20 |
public static final int |
MEASURE_DEFAULT_FONTSIZE |
15 |
public static final int |
MINIMIZATION_ATOM_MAX |
200 |
public static final float |
MINIMIZE_FIXED_RANGE |
5.0f |
public static final java.lang.String |
MODELKIT_ZAP_STRING |
"5\n\nC 0 0 0\nH .63 .63 .63\nH -.63 -.63 .63\nH -.63 .63 -.63\nH .63 -.63 -.63" |
public static final java.lang.String |
MODELKIT_ZAP_TITLE |
"Jmol Model Kit" |
public static final int |
MOUSE_NONE |
-1 |
public static final byte |
MULTIBOND_ALWAYS |
3 |
public static final byte |
MULTIBOND_NEVER |
0 |
public static final byte |
MULTIBOND_NOTSMALL |
2 |
public static final byte |
MULTIBOND_WIREFRAME |
1 |
public static final java.lang.String |
NOTE_SCRIPT_FILE |
"NOTE: file recognized as a script file: " |
public static final boolean |
officialRelease |
false |
public static final java.lang.String |
PDB_ANNOTATIONS |
";dssr;rna3d;dom;val;" |
public static final int |
POINTER_BACKGROUND |
2 |
public static final int |
POINTER_NONE |
0 |
public static final int |
POINTER_ON |
1 |
public static final float |
radiansPerDegree |
0.01745329238474369f |
public static final java.lang.String |
REPAINT_IGNORE |
"\u0001## REPAINT_IGNORE ##" |
public static final java.lang.String |
SCRIPT_COMPLETED |
"Script completed" |
public static final java.lang.String |
SCRIPT_EDITOR_IGNORE |
"\u0001## EDITOR_IGNORE ##" |
public static final int |
SHAPE_AXES |
34 |
public static final int |
SHAPE_BACKBONE |
9 |
public static final int |
SHAPE_BALLS |
0 |
public static final int |
SHAPE_BBCAGE |
32 |
public static final int |
SHAPE_CARTOON |
11 |
public static final int |
SHAPE_CGO |
23 |
public static final int |
SHAPE_CONTACT |
25 |
public static final int |
SHAPE_DIPOLES |
17 |
public static final int |
SHAPE_DOTS |
16 |
public static final int |
SHAPE_DRAW |
22 |
public static final int |
SHAPE_ECHO |
31 |
public static final int |
SHAPE_ELLIPSOIDS |
20 |
public static final int |
SHAPE_FRANK |
36 |
public static final int |
SHAPE_GEOSURFACE |
19 |
public static final int |
SHAPE_HALOS |
8 |
public static final int |
SHAPE_HOVER |
35 |
public static final int |
SHAPE_HSTICKS |
2 |
public static final int |
SHAPE_ISOSURFACE |
24 |
public static final int |
SHAPE_LABELS |
5 |
private static final int |
SHAPE_LAST_ATOM_VIS_FLAG |
26 |
public static final int |
SHAPE_LCAOCARTOON |
26 |
public static final int |
SHAPE_MAX |
37 |
public static final int |
SHAPE_MAX_HAS_ID |
32 |
public static final int |
SHAPE_MAX_HAS_SETVIS |
33 |
public static final int |
SHAPE_MAX_MESH_COLLECTION |
30 |
public static final int |
SHAPE_MAX_SECONDARY |
16 |
public static final int |
SHAPE_MAX_SIZE_ZERO_ON_RESTRICT |
21 |
public static final int |
SHAPE_MAX_SPECIAL |
23 |
public static final int |
SHAPE_MAX_SURFACE |
30 |
public static final int |
SHAPE_MEASURES |
6 |
public static final int |
SHAPE_MESHRIBBON |
13 |
public static final int |
SHAPE_MIN_HAS_ID |
22 |
public static final int |
SHAPE_MIN_HAS_SETVIS |
8 |
public static final int |
SHAPE_MIN_MESH_COLLECTION |
22 |
public static final int |
SHAPE_MIN_SECONDARY |
9 |
public static final int |
SHAPE_MIN_SPECIAL |
16 |
public static final int |
SHAPE_MIN_SURFACE |
24 |
public static final int |
SHAPE_MO |
27 |
public static final int |
SHAPE_NBO |
28 |
public static final int |
SHAPE_PLOT3D |
30 |
public static final int |
SHAPE_PMESH |
29 |
public static final int |
SHAPE_POLYHEDRA |
21 |
public static final int |
SHAPE_RIBBONS |
14 |
public static final int |
SHAPE_ROCKETS |
15 |
public static final int |
SHAPE_SSSTICKS |
3 |
public static final int |
SHAPE_STARS |
7 |
public static final int |
SHAPE_STICKS |
1 |
public static final int |
SHAPE_STRANDS |
12 |
public static final int |
SHAPE_STRUTS |
4 |
public static final int |
SHAPE_TRACE |
10 |
public static final int |
SHAPE_UCCAGE |
33 |
public static final int |
SHAPE_VECTORS |
18 |
public static final java.lang.String |
STATE_VERSION_STAMP |
"# Jmol state version " |
public static final int |
VALIGN_BOTTOM |
2 |
public static final int |
VALIGN_MIDDLE |
3 |
public static final int |
VALIGN_TOP |
1 |
public static final int |
VALIGN_XY |
0 |
public static final int |
VALIGN_XYZ |
4 |
public static final int |
VIS_BACKBONE_FLAG |
8192 |
public static final int |
VIS_BALLS_FLAG |
16 |
public static final int |
VIS_BOND_FLAG |
32 |
public static final int |
VIS_CARTOON_FLAG |
32768 |
public static final int |
VIS_LABEL_FLAG |
512 |
public static final int |
XY_ZTOP |
100 |
public static final java.lang.String |
ZAP_TITLE |
"zapped" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MIN_DELAY_MS |
20 |
Modifier and Type | Constant Field | Value |
---|---|---|
protected static final java.lang.String |
SCENE_TAG |
"###scene.spt###" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
atomExpression |
"<atom selection>" |
private static final int |
PROP_ANIMATION_INFO |
5 |
private static final int |
PROP_APPLET_INFO |
0 |
private static final int |
PROP_ATOM_INFO |
14 |
private static final int |
PROP_ATOM_LIST |
13 |
private static final int |
PROP_AUXILIARY_INFO |
24 |
private static final int |
PROP_BOND_INFO |
15 |
private static final int |
PROP_BOUNDBOX_INFO |
25 |
private static final int |
PROP_CENTER_INFO |
10 |
private static final int |
PROP_CHAIN_INFO |
16 |
private static final int |
PROP_CONSOLE_TEXT |
37 |
private static final int |
PROP_COUNT |
44 |
private static final int |
PROP_DATA_INFO |
26 |
private static final int |
PROP_DOM_INFO |
42 |
private static final int |
PROP_ERROR_MESSAGE |
33 |
private static final int |
PROP_EVALUATE |
28 |
private static final int |
PROP_EXTRACT_MODEL |
20 |
private static final int |
PROP_FILE_INFO |
32 |
private static final int |
PROP_FILECONTENTS |
4 |
private static final int |
PROP_FILECONTENTS_PATH |
3 |
private static final int |
PROP_FILEHEADER |
2 |
private static final int |
PROP_FILENAME |
1 |
private static final int |
PROP_IMAGE |
27 |
private static final int |
PROP_ISOSURFACE_DATA |
36 |
private static final int |
PROP_ISOSURFACE_INFO |
35 |
private static final int |
PROP_JMOL_STATUS |
21 |
private static final int |
PROP_JMOL_VIEWER |
22 |
private static final int |
PROP_JSPECVIEW |
38 |
private static final int |
PROP_LIGAND_INFO |
7 |
private static final int |
PROP_MEASUREMENT_INFO |
9 |
private static final int |
PROP_MENU |
29 |
private static final int |
PROP_MESSAGE_QUEUE |
23 |
private static final int |
PROP_MINIMIZATION_INFO |
30 |
private static final int |
PROP_MODEL_INFO |
6 |
private static final int |
PROP_MOLECULE_INFO |
18 |
private static final int |
PROP_MOUSE_INFO |
34 |
private static final int |
PROP_NMR_INFO |
40 |
private static final int |
PROP_ORIENTATION_INFO |
11 |
private static final int |
PROP_POINTGROUP_INFO |
31 |
private static final int |
PROP_POLYMER_INFO |
17 |
private static final int |
PROP_SCRIPT_QUEUE_INFO |
39 |
private static final int |
PROP_SHAPE_INFO |
8 |
private static final int |
PROP_STATE_INFO |
19 |
private static final int |
PROP_TRANSFORM_INFO |
12 |
private static final int |
PROP_VAL_INFO |
43 |
private static final int |
PROP_VAR_INFO |
41 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
FALSE |
0 |
private static final int |
TRUE |
1 |
private static final int |
UNKNOWN |
-1 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MAX_ACTION_UNDO |
100 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
OBJ_AXIS1 |
1 |
public static final int |
OBJ_AXIS2 |
2 |
public static final int |
OBJ_AXIS3 |
3 |
public static final int |
OBJ_BACKGROUND |
0 |
public static final int |
OBJ_BOUNDBOX |
4 |
public static final int |
OBJ_FRANK |
6 |
public static final int |
OBJ_MAX |
8 |
public static final int |
OBJ_UNITCELL |
5 |
private static final java.lang.String |
objectNameList |
"background axis1 axis2 axis3 boundbox unitcell frank " |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
SYNC_DISABLE |
3 |
public static final int |
SYNC_DRIVER |
1 |
public static final int |
SYNC_ENABLE |
4 |
public static final int |
SYNC_OFF |
0 |
public static final int |
SYNC_SLAVE |
2 |
public static final int |
SYNC_STEREO |
5 |
Modifier and Type | Constant Field | Value |
---|---|---|
static final float |
DEFAULT_CAMERA_DEPTH |
3.0f |
static final int |
DEFAULT_NAV_FPS |
10 |
static final boolean |
DEFAULT_PERSPECTIVE_DEPTH |
true |
static final int |
DEFAULT_PERSPECTIVE_MODEL |
11 |
static final int |
DEFAULT_SPIN_FPS |
30 |
static final int |
DEFAULT_SPIN_Y |
30 |
public static final int |
DEFAULT_STEREO_DEGREES |
-5 |
public static final float |
DEFAULT_VISUAL_RANGE |
5.0f |
public static final double |
degreesPerRadian |
57.29577951308232 |
public static final int |
MAXIMUM_ZOOM_PERCENTAGE |
200000 |
private static final int |
MAXIMUM_ZOOM_PERSPECTIVE_DEPTH |
10000 |
public static final int |
MODE_NAVIGATION |
1 |
public static final int |
MODE_PERSPECTIVE_PYMOL |
2 |
public static final int |
MODE_STANDARD |
0 |
public static final int |
NAV_MODE_IGNORE |
-2 |
public static final int |
NAV_MODE_NEWXY |
2 |
public static final int |
NAV_MODE_NEWXYZ |
3 |
public static final int |
NAV_MODE_NEWZ |
4 |
public static final int |
NAV_MODE_NONE |
0 |
public static final int |
NAV_MODE_RESET |
1 |
public static final int |
NAV_MODE_ZOOMED |
-1 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MODE_3D |
0 |
private static final int |
MODE_4D_WX |
1 |
private static final int |
MODE_4D_WY |
2 |
private static final int |
MODE_4D_WZ |
3 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final java.lang.String |
SYNC_GRAPHICS_MESSAGE |
"GET_GRAPHICS" |
public static final java.lang.String |
SYNC_NO_GRAPHICS_MESSAGE |
"SET_GRAPHICS_OFF" |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final int |
ALT |
8 |
public static final int |
BUTTON_MASK |
28 |
public static final int |
BUTTON_MODIFIER_MASK |
63 |
public static final int |
CLICK |
32768 |
public static final int |
COUNT_MASK |
768 |
public static final int |
CTRL |
2 |
public static final int |
CTRL_ALT |
10 |
public static final int |
CTRL_SHIFT |
3 |
public static final int |
DOUBLE |
512 |
public static final int |
DOWN |
4096 |
public static final int |
DRAG |
8192 |
public static final int |
LEFT |
16 |
public static final int |
MAC_COMMAND |
20 |
public static final int |
MIDDLE |
8 |
public static final int |
MODE_MASK |
61440 |
public static final int |
RIGHT |
4 |
public static final int |
SHIFT |
1 |
public static final int |
SINGLE |
256 |
public static final int |
UP |
16384 |
public static final int |
WHEEL |
32 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final float |
AMPLITUDE_MAX |
1.0f |
private static final float |
AMPLITUDE_PRECISION |
0.009999999776482582f |
private static final float |
AMPLITUDE_VALUE |
0.5f |
static final java.lang.String |
COLLECTION |
"collection" |
static final java.lang.String |
FF |
"ff" |
private static final int |
FPS_MAX |
30 |
static final java.lang.String |
NEXT |
"next" |
static final java.lang.String |
PAUSE |
"pause" |
private static final float |
PERIOD_MAX |
1.0f |
private static final float |
PERIOD_PRECISION |
0.0010000000474974513f |
private static final float |
PERIOD_VALUE |
0.5f |
static final java.lang.String |
PLAY |
"play" |
static final java.lang.String |
PREVIOUS |
"prev" |
private static final int |
RADIUS_MAX |
19 |
private static final int |
RADIUS_VALUE |
3 |
static final java.lang.String |
REWIND |
"rewind" |
static final java.lang.String |
SAVE |
"save" |
private static final float |
SCALE_MAX |
2.0f |
private static final float |
SCALE_PRECISION |
0.009999999776482582f |
private static final float |
SCALE_VALUE |
1.0f |
static final java.lang.String |
VECTOR |
"vector" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
DEFAULT_BASIS |
"3-21G**" |
private static final java.lang.String |
DEFAULT_CHARGE |
"0" |
private static final java.lang.String |
DEFAULT_METHOD |
"HF" |
private static final java.lang.String |
DEFAULT_MULT |
"1" |
private static final java.lang.String |
DFT_LIST |
"LSDA BLYP BP86 BPW91 OLYP OP86 OPW91 PBEPBE VSXC HCTH93 NCTH147 HCTH407 TPSSTPSS B3LYP B3PW91" |
private static final java.lang.String |
NOBASIS_LIST |
"AM1 PM3 CNDO INDO MNDO MINDO3 ZINDO UFF AMBER DREIDING Huckel" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final java.lang.String |
aboutAction |
"about" |
private static final java.lang.String |
atomsetchooserAction |
"atomsetchooser" |
static final java.lang.String |
chemFileProperty |
"chemFile" |
private static final java.lang.String |
closeAction |
"close" |
private static final java.lang.String |
consoleAction |
"console" |
private static final java.lang.String |
copyImageActionProperty |
"copyImage" |
private static final java.lang.String |
copyScriptActionProperty |
"copyScript" |
private static final java.lang.String |
creditsAction |
"credits" |
private static final java.lang.String |
EDITOR_WINDOW_NAME |
"ScriptEditor" |
private static final java.lang.String |
editorAction |
"editor" |
private static final java.lang.String |
exitAction |
"exit" |
private static final java.lang.String |
exportActionProperty |
"export" |
private static final java.lang.String |
FILE_OPEN_WINDOW_NAME |
"FileOpen" |
private static final java.lang.String |
gaussianAction |
"gauss" |
private static final java.lang.String |
nboAction |
"nbo" |
private static final java.lang.String |
newAction |
"new" |
private static final java.lang.String |
newwinAction |
"newwin" |
private static final java.lang.String |
openAction |
"open" |
private static final java.lang.String |
openmolAction |
"openmol" |
private static final java.lang.String |
openpdbAction |
"openpdb" |
private static final java.lang.String |
openurlAction |
"openurl" |
private static final java.lang.String |
pasteClipboardActionProperty |
"pasteClipboard" |
private static final java.lang.String |
povrayActionProperty |
"povray" |
private static final java.lang.String |
printActionProperty |
"print" |
private static final java.lang.String |
recentFilesAction |
"recentFiles" |
private static final java.lang.String |
resizeAction |
"resize" |
private static final java.lang.String |
SCRIPT_WINDOW_NAME |
"ScriptWindow" |
private static final java.lang.String |
SURFACETOOL_WINDOW_NAME |
"SurfaceToolWindow" |
private static final java.lang.String |
surfaceToolActionProperty |
"surfaceTool" |
private static final java.lang.String |
toWebActionProperty |
"toweb" |
private static final java.lang.String |
uguideAction |
"uguide" |
private static final java.lang.String |
WEB_MAKER_WINDOW_NAME |
"JmolWebPageMaker" |
private static final java.lang.String |
whatsnewAction |
"whatsnew" |
private static final java.lang.String |
writeActionProperty |
"write" |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
MAX_FILES |
10 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
BORDERSIZE |
10 |
private static final int |
STATUSSIZE |
10 |
Modifier and Type | Constant Field | Value |
---|---|---|
public static final java.lang.String |
ALL_BUTTONS |
"Editor Variables Clear History State UndoRedo Close Help" |
Modifier and Type | Constant Field | Value |
---|---|---|
static final int |
CIRCLE_FRACTION |
3 |
static final int |
DEGREES |
0 |
static final int |
GRADIANS |
2 |
static final int |
RADIANS |
1 |
static final int |
UNITS_PI |
4 |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final long |
serialVersionUID |
1L |
Modifier and Type | Constant Field | Value |
---|---|---|
private static final int |
IN_JMOL |
1 |
private static final int |
STAND_ALONE |
0 |