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java.lang.Objectorg.jmol.adapter.smarter.AtomSetCollectionReader
org.jmol.adapter.readers.more.SpartanInputReader
abstract class SpartanInputReader
Field Summary | |
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protected int |
atomCount
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(package private) int |
atomCount0
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protected int |
bondCount
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protected java.lang.String |
bondData
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(package private) int |
modelAtomCount
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protected java.lang.String |
modelName
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Fields inherited from class org.jmol.adapter.smarter.AtomSetCollectionReader |
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ANGSTROMS_PER_BOHR, applySymmetryToBonds, atomSetCollection, bsFilter, bsModels, calculationType, doApplySymmetry, filter, getHeader, haveAtomFilter, havePartialChargeFilter, htParams, ignoreFileSymmetryOperators, ignoreFileUnitCell, iHaveSymmetryOperators, iHaveUnitCell, isTrajectory, latticeCells, line, modelNumber, needToApplySymmetry, next, prevline, reader, readerName, spaceGroup, templateAtomCount |
Constructor Summary | |
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SpartanInputReader()
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Method Summary | |
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private void |
readAtomNames()
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private void |
readBonds(int atomCount0)
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private void |
readInputAtoms()
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private void |
readInputHeader()
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protected void |
readInputRecords()
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private void |
readTransform()
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Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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protected java.lang.String modelName
protected int atomCount
protected int bondCount
protected java.lang.String bondData
int modelAtomCount
int atomCount0
Constructor Detail |
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SpartanInputReader()
Method Detail |
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protected void readInputRecords()
private void readTransform() throws java.lang.Exception
java.lang.Exception
private void readInputHeader() throws java.lang.Exception
java.lang.Exception
private void readInputAtoms() throws java.lang.Exception
java.lang.Exception
private void readAtomNames() throws java.lang.Exception
java.lang.Exception
private void readBonds(int atomCount0) throws java.lang.Exception
java.lang.Exception
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