All Classes

AboutDialog AdfReader AlphaMonomer AlphaPolymer AminoMonomer AminoPolymer ApbsReader AppletWrapper ArrayListTransferHandler ArrayUtil Atom Atom AtomCollection AtomData AtomDataReader AtomDataServer AtomIndexIterator AtomIteratorWithinModel AtomIteratorWithinSet AtomSetChooser AtomSetChooser.AtomSet AtomSetCollection AtomSetCollectionReader AtomShape Awt3D Axes AxesGenerator AxesRenderer Backbone BackboneGenerator BackboneRenderer Balls BallsGenerator BallsRenderer Base64 Bbcage BbcageGenerator BbcageRenderer BinaryDocument BioPolymer BioShape BioShapeCollection BioShapeRenderer BitSetUtil Bond Bond Bond.BondSet BondCollection BondIterator BondIteratorSelected BoxInfo Bspf Bspt Calculation Calculations CalculationsUFF CarbohydrateMonomer CarbohydratePolymer Cartoon CartoonGenerator CartoonRenderer Chain CifReader Circle3D ClassPreloader Colix3D ColorEncoder ColorManager CommandHistory Compiler Compiler.FlowContext CompoundDocument Console ConsoleDocument ConsoleTextArea ConsoleTextPane CsfReader CubeIterator CubeReader CubeReader Cylinder3D DataManager DCT DefaultLogger Dialog Dipole Dipoles DipolesGenerator DipolesRenderer DisplayPanel Dots DotsGenerator DotsRenderer Draw DrawGenerator DrawMesh DrawRenderer Echo EchoGenerator EchoRenderer Eigen Element Ellipsoids Ellipsoids.Ellipsoid EllipsoidsGenerator EllipsoidsRenderer EnterListener EnvelopeCalculation Escape Eval Eval.Context Export3D FFParam FileChooser FileDropper FileManager FilePreview FileReader FileTyper FoldingXyzReader Font3D FontLineShape FontLineShapeRenderer ForceField ForceFieldUFF FrameExportJmolAdapter FrameRenderer Frank FrankGenerator FrankRenderer Function GamessReader GamessUKReader GamessUSReader GaussianReader Geodesic GeoSurface GeoSurfaceGenerator GeoSurfaceRenderer GhemicalMMReader GifEncoder GraphCharacteristics GraphControlData Graphics3D Group GT GT.Language GuiMap GuiMap GuiMap.GetKey GuiMap.GetKey HallInfo Halos HalosGenerator HalosRenderer Helix HelpDialog Hermite3D HinReader HistoryFile Hover HoverRenderer Huffman ImageCreator ImageEncoder ImageSelection Int2IntHash Int2IntHash.Entry Interface InvalidSmilesException IsoFxyReader IsoMepReader IsoMOReader IsoPlaneReader IsoShapeReader IsoSolventReader Isosurface IsosurfaceGenerator IsosurfaceMesh IsosurfaceRenderer JaguarReader JaguarReader JmeReader Jmol Jmol Jmol.ActionChangedListener Jmol.ConsoleAction JmolAdapter JmolAppletInterface JmolAppletRegistry JmolBioResolver JmolConstants JmolDialogInterface JmolExportInterface JmolFileReaderInterface JmolImageCreatorInterface JmolInstance JmolPopup JmolPopupAwt JmolPopupSwing JmolRendererInterface JmolResourceHandler JmolSelectionListener JmolSimpleViewer JmolStatusListener JmolViewer JpegEncoder JpegInfo Jvm12 Jvxl JvxlData JvxlReader Labels LabelsGenerator LabelsRenderer LcaoCartoon LcaoCartoonGenerator LcaoCartoonRenderer Leaf LimitedLineReader LimitedLineReader Line3D Logger LoggerInterface LogPanel LoopedStreams MarchingCubes MarchingSquares MarchingSquares.ContourVertex MarchingSquares.PlanarSquare Measure Measurement MeasurementPending MeasurementTable Measures MeasuresGenerator MeasuresRenderer MepCalculation MepCalculationInterface Mesh MeshCollection MeshData MeshDataServer MeshFileCollection MeshRenderer MeshRibbon MeshRibbonGenerator MeshRibbonRenderer MinAtom MinBond Minimizer MinimizerInterface MOCalculation MOCalculationInterface Model ModelCollection ModelCollection.StateScript ModelCollection.Structure ModelLoader ModelManager ModelSet Mol2Reader MoldenReader MolecularOrbital MolecularOrbitalGenerator MolecularOrbitalRenderer Molecule Molecules MolReader MonitorInputStream MonitorInputStream Monomer MopacData MopacDataReader MopacGraphfReader MopacReader MouseManager MouseManager10 MouseManager11 MouseManager14 MouseWrapper11 MouseWrapper14 Node Normix3D NucleicMonomer NucleicPolymer NumericDataUtils NWChemReader Object2d Object2dShape OdysseyReader OdysseyXMLReader Orbitals Parameters Parser PatternMatcher PdbReader PhosphorusMonomer PhosphorusPolymer PickingManager Platform3D PltFormattedReader Pmesh PmeshGenerator PmeshRenderer PngEncoder Point3fi PointGroup Polyhedra PolyhedraGenerator PolyhedraRenderer Polymer PopInJmol PopupResourceBundle PovrayDialog PovraySaver PpmEncoder PqrReader PreferencesDialog PropertyManager ProteinStructure PsiReader QchemReader Quadric QuantumCalculation Quaternion RecentFilesDialog RepaintManager Resolver Resolver Rgb16 Ribbons RibbonsGenerator RibbonsRenderer Rockets RocketsGenerator RocketsRenderer Rotation SaisieDlg ScriptButtons ScriptManager ScriptWindow SelectionManager Shade3D Shape ShapeRenderer Sheet ShelxReader SmarterJmolAdapter SmilesAtom SmilesBond SmilesMatcherInterface SmilesMolecule SmilesParser SpaceGroup SpartanArchive SpartanReader SpartanSmolReader Sphere3D Splash Stars StarsGenerator StarsRenderer StateManager StateManager.Connection StatusBar StatusManager Sticks SticksGenerator SticksRenderer Strands StrandsGenerator StrandsRenderer StringDataUtils Structure SurfaceGenerator Swing3D Symmetry SymmetryInfo SymmetryInterface SymmetryOperation TempArray Test Text Text3D TextFormat TextShape TickerThread Token Token.Token2 Trace TraceGenerator TraceRenderer TransformManager TransformManager10 TransformManager11 Translation Triangle3D Turn Uccage UccageGenerator UccageRenderer UnitCell Util V3000Reader Vectors VectorsGenerator VectorsRenderer VertexDataServer Viewer Visua VolumeData VolumeDataInterface VolumeDataReader VolumeFileReader VoxelReader WebExport WebMaker WebMOReader WebPanel WhatsNewDialog WrappedApplet WrappedAppletLoader XmlArgusReader XmlChem3dReader XmlCmlReader XmlMolproReader XmlOdysseyReader XmlReader XmlReader.DummyResolver XplorReader XyzReader ZipUtil ZoneVisu _Exporter _MayaExporter _PovrayExporter _VrmlExporter