MDAnalysis
MDAnalysis.analysis.align
MDAnalysis.analysis.base
MDAnalysis.analysis.contacts
MDAnalysis.analysis.density
MDAnalysis.analysis.diffusionmap
MDAnalysis.analysis.distances
MDAnalysis.analysis.encore.bootstrap
MDAnalysis.analysis.encore.clustering.cluster
MDAnalysis.analysis.encore.clustering.ClusterCollection
MDAnalysis.analysis.encore.clustering.ClusteringMethod
MDAnalysis.analysis.encore.confdistmatrix
MDAnalysis.analysis.encore.covariance
MDAnalysis.analysis.encore.dimensionality_reduction.DimensionalityReductionMethod
MDAnalysis.analysis.encore.dimensionality_reduction.reduce_dimensionality
MDAnalysis.analysis.encore.similarity
MDAnalysis.analysis.encore.utils
MDAnalysis.analysis.gnm
MDAnalysis.analysis.hbonds.hbond_analysis
MDAnalysis.analysis.hbonds.hbond_autocorrel
MDAnalysis.analysis.helanal
MDAnalysis.analysis.hole
MDAnalysis.analysis.leaflet
MDAnalysis.analysis.legacy.x3dna
MDAnalysis.analysis.lineardensity
MDAnalysis.analysis.nuclinfo
MDAnalysis.analysis.pca
MDAnalysis.analysis.polymer
MDAnalysis.analysis.psa
MDAnalysis.analysis.rdf
MDAnalysis.analysis.rms
MDAnalysis.analysis.waterdynamics
MDAnalysis.auxiliary.__init__
MDAnalysis.auxiliary.base
MDAnalysis.auxiliary.core
MDAnalysis.auxiliary.XVG
MDAnalysis.coordinates.__init__
MDAnalysis.coordinates.base
MDAnalysis.coordinates.chain
MDAnalysis.coordinates.core
MDAnalysis.coordinates.CRD
MDAnalysis.coordinates.DCD
MDAnalysis.coordinates.DLPoly
MDAnalysis.coordinates.DMS
MDAnalysis.coordinates.GMS
MDAnalysis.coordinates.GRO
MDAnalysis.coordinates.INPCRD
MDAnalysis.coordinates.LAMMPS
MDAnalysis.coordinates.memory
MDAnalysis.coordinates.MMTF
MDAnalysis.coordinates.MOL2
MDAnalysis.coordinates.null
MDAnalysis.coordinates.PDB
MDAnalysis.coordinates.PDBQT
MDAnalysis.coordinates.PQR
MDAnalysis.coordinates.TRJ
MDAnalysis.coordinates.TRR
MDAnalysis.coordinates.TRZ
MDAnalysis.coordinates.XDR
MDAnalysis.coordinates.XTC
MDAnalysis.coordinates.XYZ
MDAnalysis.core.__init__
MDAnalysis.core.groups
MDAnalysis.core.selection
MDAnalysis.core.Timeseries
MDAnalysis.core.topology
MDAnalysis.core.topologyattrs
MDAnalysis.core.topologyobjects
MDAnalysis.core.universe
MDAnalysis.exceptions
MDAnalysis.lib
MDAnalysis.lib.c_distances
MDAnalysis.lib.c_distances_openmp
MDAnalysis.lib.distances
MDAnalysis.lib.formats.libmdaxdr
MDAnalysis.lib.log
MDAnalysis.lib.mdamath
MDAnalysis.lib.NeighborSearch
MDAnalysis.lib.qcprot
MDAnalysis.lib.transformations
MDAnalysis.lib.util
MDAnalysis.selections.base
MDAnalysis.selections.charmm
MDAnalysis.selections.gromacs
MDAnalysis.selections.jmol
MDAnalysis.selections.pymol
MDAnalysis.selections.vmd
MDAnalysis.topology.__init__
MDAnalysis.topology.base
MDAnalysis.topology.core
MDAnalysis.topology.CRDParser
MDAnalysis.topology.DLPolyParser
MDAnalysis.topology.DMSParser
MDAnalysis.topology.ExtendedPDBParser
MDAnalysis.topology.GMSParser
MDAnalysis.topology.GROParser
MDAnalysis.topology.guessers
MDAnalysis.topology.HoomdXMLParser
MDAnalysis.topology.LAMMPSParser
MDAnalysis.topology.MMTFParser
MDAnalysis.topology.MOL2Parser
MDAnalysis.topology.PDBParser
MDAnalysis.topology.PDBQTParser
MDAnalysis.topology.PQRParser
MDAnalysis.topology.PSFParser
MDAnalysis.topology.tables
MDAnalysis.topology.TOPParser
MDAnalysis.topology.tpr
MDAnalysis.topology.tpr.obj
MDAnalysis.topology.tpr.setting
MDAnalysis.topology.tpr.utils
MDAnalysis.topology.TPRParser
MDAnalysis.topology.XYZParser
MDAnalysis.units
MDAnalysis.version
MDAnalysis.visualization.streamlines
MDAnalysis.visualization.streamlines_3D