Public Member Functions | |
SimpleSearchEngine () | |
Protected Member Functions | |
void | registerOptionsAndFlags_ () |
vector< ResidueModification > | getModifications_ (StringList modNames) |
void | preprocessSpectra_ (PeakMap &exp, double fragment_mass_tolerance, bool fragment_mass_tolerance_unit_ppm) |
void | postProcessHits_ (const PeakMap &exp, const vector< vector< PeptideHit > > &peptide_hits, vector< ProteinIdentification > &protein_ids, vector< PeptideIdentification > &peptide_ids, Size top_hits) |
ExitCodes | main_ (int, const char **) |
Static Protected Member Functions | |
template<typename SpectrumType > | |
static void | deisotopeAndSingleChargeMSSpectrum (SpectrumType &in, Int min_charge, Int max_charge, double fragment_tolerance, bool fragment_unit_ppm, bool keep_only_deisotoped=false, Size min_isopeaks=3, Size max_isopeaks=10, bool make_single_charged=true) |
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References NUMBER_OF_THREADS.
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OpenMS / TOPP release 2.3.0 | Documentation generated on Thu Mar 8 2018 04:35:37 using doxygen 1.8.14 |